Gene BURPS668_A1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1281 
Symbol 
ID4888822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand- 
Start bp1212777 
End bp1213388 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID640131220 
ProductLysE family translocator protein 
Protein accessionYP_001062278 
Protein GI126445331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.18583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTAT CCAGCCTCGC CCTCTTCGCC GCCGCCCTGC TGGTCGCCGC CGGCTCGCCC 
GGCCCGAGCA TCGCCGCGCT GGTCGCGCGC GTGCTGACCA ACGGAGTGCG CGACGTGTTG 
CCGTTCCTCG CGGCGATGTG GCTCGGCGAA GTGATCTGGC TGACCTGCGC GGTAGCCGGG 
CTCACGGCGC TCGCGCACAC GTTCGCATTC GGCTTTCTCG TGCTGAAGTT CGCGGGCATC 
GCCTACCTCG TGTTTCTCGC GTGGAAGATG TGGTTCGCGC CCGCCGATGA GCCGTCCGGC 
CAGCTCCCGC GCGGACAGTC GCCGTTGCGC ATGTTTCTGA CGGGCATCGC GGTCACGCTC 
GGCAACCCGA AAATCATGAT CTTCTATGTC GCGCTGCTGC CGACGATGGT GGATCTGTCT 
CGCGCAGGGG CCGTCGCATG GCTCGAATTG ACGTTGACGC TGCTCGTCGT GTTGATCACG 
GTCGACTGCG CATGGGCATG GCTCGCGGCG CGCGCCCGCA GGCTGCTGAC GAGCCGCCGC 
GCGATGAAGG CGGCGAATCG CGCGAGCGCG GCCGCGATGG CGGGCGCCGC CGTCGCGATC 
GCGATGCGCT GA
 
Protein sequence
MSLSSLALFA AALLVAAGSP GPSIAALVAR VLTNGVRDVL PFLAAMWLGE VIWLTCAVAG 
LTALAHTFAF GFLVLKFAGI AYLVFLAWKM WFAPADEPSG QLPRGQSPLR MFLTGIAVTL 
GNPKIMIFYV ALLPTMVDLS RAGAVAWLEL TLTLLVVLIT VDCAWAWLAA RARRLLTSRR 
AMKAANRASA AAMAGAAVAI AMR