| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1203 |
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| Symbol | pbpC |
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| ID | 4888129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 1137138 |
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| End bp | 1139909 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640131142 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001062200 |
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| Protein GI | 126443914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGTCGA CGCTCGCGCG GCGGGCCGCG CAGGCGGCCG TGCCGCGATG GGTTTGGCCG
TTCGCCCGAC CGGCCGGGTG GTCGCTCGGT CCGGTGTTCG GTCCGGTGTT CGGTCCGGTG
TTCGGTCCGG TGTTCGGTCC GGTGTTCGGT TCGGCGTTCG GTTCGGCGTT CGGTTCGGCG
TCCGGTTCGG CGTCCGGTTC GGCGTCCGGT CCGGCGTTCG CGGCGTTCGG TCTCGCGCTC
GCCCCCCTGC TCGCCGCGCC GCCCGTTCGG CCGCGCGCCC GGCGGAACCC GCGCCCGTGC
GGCTCGCCGC GGCGCGCGGC GCTCCCGCGC GCGCGAACGG CGGCGAGCCG CACGCTCGCC
GTCGCGATGC TCGCCGCGCC GCTCGCCGCG CACGCGCTGC CGGCCTACGA CGACGTGCGG
CGCGACTGGC GCAGCACCGA CTGGTTGCTG CTCGCACGCG ACGGCACGCC GCTTCAGCGC
ACGCGCGTGG AGCTCACCGA GCGGCGCGGC GACTGGATCG CGCTCGCCGA CGTATCGCCC
GCGTTTCGCG AGGCGATCGT CGTATCGGAG GACAAGCGCT TCTACGCGCA CAGCGGCGTC
GACTGGCGCG GCATCGCGGG CGCCGCATGG GGCAATCTGT GGAACGAGCG CACGCGCGGC
GCGTCGACGG TGACGATGCA GCTCGCCGGC CTGCTGAGCG ACACGCCGCG CCGCTCGGGC
CAGCGCTCGC TGCCGCAGAA GGCCGCGCAG GCGATGAACG CGCTGCGGCT CGAACGCGGC
TGGCGCAAGG ATCAGATCCT CGAGGCGTAT CTGAATCTCG TGCCGTTTCG CGGCGAGACG
GTCGGGCTCG ACGCGATGTC GCACGCGCTG TTCGGCAAGG CGCCGTCGGG GCTCGACGTG
CGCGAATCGG CGGTGGCCGC CGCGCTCGTG CGCGCGCCGA ACGCGTCCGC CGCGAAAGTG
GCCGAACGCG CGTGCCGGAT CCTGCGCGAC CTGCGCGCCG CGCAGCCGTG CGAATCGCTC
GACGGCTACG TGCGCTTCGT GACGTCCGCC CCGCCGGGCG CCGCGCGCGA CGGCGGCGAA
GCGCTCGCGC CGCACTTCGC GCGGCGCGTC GCGGCCGAGG TGAAGCCCGG CGCGGGCGCG
CGCGTGCGCT CCACGCTCGA CGCGCCGCTG CAGCGCTTCG CGCGCGACAC GCTCACGCGC
GCGCTCGCCG AGCTCAACGC GCCCGCCCAT CGGCGCCACG TGCAGGACGG CGCGGTCGTC
GTGATCGACA ACGCGACGGG CGAGATCCGC GCATGGGTCG GCTCGTCGGG CGCGCTGTCG
GCCGCGCGCG ACGTCGACGC GGTGCTCGCG CCGCGCCAGG CCGGCTCGAC GCTCAAGCCG
TTCCTCTACG CGCAGGCGCT CGACGAACGG CGCCTCACCG CCGCTTCGCT GCTCGACGAC
GCGCCGATCG ATCTCGCCGC GGGCGGCGGC CTGTACATCC CGCAGAACTA CGACAAGCAC
TTCAAGGGCT GGGTCAGCGT GCGCACCGCG CTCGGCGGAT CGCTGAACGT GCCGGCCGTG
CGCACGCTCG TGCTCGTCAC GCCGCACCGC TTCGCGCGCA CGCTCACCGC GCTCGGGCTG
CCGCTCGCCG AAGAAGGCGA TTACTACGGT TTCAGCCTCG CGCTCGGCAG CGCCGACGTC
ACGCTGCTGT CGCTCGCGAA CGCGTACCGC GCGCTCGCCA ACGGCGGCGT CGCGCGGGCG
ACGCTCGACG TGCCGGGCGG AAGCGGAAGC GGAAGCGGAA GCGGAAGCGG AAGCCGGAAC
GGAAACGGAA ACGGAAACGG AAACGGAAAC GGAAATGACG CCGTCACGTC GGCCCCGTTC
GCGCCGGCCG TTTCGAAATC GAAGGTTGGC GCGTCAGCGG TTTTCCCGCG GGCCGTCTCG
ACGAAGGCCG AGCCCGCGAA GCCAGTGCCC ACGGCGGCCC TTTCCCCCAC GAGCGCTTCG
ACATCGACCG CCGGCAAGCC GGCGGCGCAC GCCGCAGCGG GCACGCGCGT ATTCAGCGAA
GCCGCGGCGT ACATCGTCAC CGACATCCTC GCCGACAACA ACGCGCGCGT GCGCACGTTC
GGCTTCGACA GCCCGCTCGC GACGCGCTTC TTCTCCGCCG TCAAGACGGG CACGAGCAAG
GACATGCGCG ACAACTGGGC GCTCGGCTAC ACGTCGCGCT ACACGGTGGG CGTGTGGGTG
GGCAACGCGG ACGGCTCGCC GATGTGGGAC GTATCGGGCG TCACGGGCGC GGCGCCCGTG
TGGGCCGCGA TCGTCGGCTA TCTGCACCGC GATCTCGCGA GCCGCGCGCC GCGCCCGCCC
GCCGGCGTCG AGCAGCGCCG CGTCGCGTTC GAACGCGACG TCGAGCCCGC GCGCCCCGAG
TGGTTCATCG CCGGCACCGC GCTCGACACG GTGCGCCTCG CCGCGCCCGC GACCGCCGCC
GCGGGCGGCG CAGACCGGCC GCGCGCGCCG CTTTCGATCG GCGCGCCGAC CGACGGCACG
ATCTTCGCGA TCGATCCGGA CATCCCGCCG AAGCACCAGC GAATCTGGTT CGAGCGCGCG
GCGGGGCGCG CGGCGCGCTT CTCGTGGCGG CTCGACGGCA AGGTGATCGG CCGCGGCGAG
CGCCTCGCGT GGATGCCGTG GCCGGGATCG CACCGGCTCG AGCTCGTCGA CGCGCGCGGC
AACGTCGCCG ACGCGGTCGG CTTCGAGGTG CGCGGCGCGT TCGCGAAGAC GGCGGCCCCA
CCGAAGCCGT GA
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| Protein sequence | MASTLARRAA QAAVPRWVWP FARPAGWSLG PVFGPVFGPV FGPVFGPVFG SAFGSAFGSA
SGSASGSASG PAFAAFGLAL APLLAAPPVR PRARRNPRPC GSPRRAALPR ARTAASRTLA
VAMLAAPLAA HALPAYDDVR RDWRSTDWLL LARDGTPLQR TRVELTERRG DWIALADVSP
AFREAIVVSE DKRFYAHSGV DWRGIAGAAW GNLWNERTRG ASTVTMQLAG LLSDTPRRSG
QRSLPQKAAQ AMNALRLERG WRKDQILEAY LNLVPFRGET VGLDAMSHAL FGKAPSGLDV
RESAVAAALV RAPNASAAKV AERACRILRD LRAAQPCESL DGYVRFVTSA PPGAARDGGE
ALAPHFARRV AAEVKPGAGA RVRSTLDAPL QRFARDTLTR ALAELNAPAH RRHVQDGAVV
VIDNATGEIR AWVGSSGALS AARDVDAVLA PRQAGSTLKP FLYAQALDER RLTAASLLDD
APIDLAAGGG LYIPQNYDKH FKGWVSVRTA LGGSLNVPAV RTLVLVTPHR FARTLTALGL
PLAEEGDYYG FSLALGSADV TLLSLANAYR ALANGGVARA TLDVPGGSGS GSGSGSGSRN
GNGNGNGNGN GNDAVTSAPF APAVSKSKVG ASAVFPRAVS TKAEPAKPVP TAALSPTSAS
TSTAGKPAAH AAAGTRVFSE AAAYIVTDIL ADNNARVRTF GFDSPLATRF FSAVKTGTSK
DMRDNWALGY TSRYTVGVWV GNADGSPMWD VSGVTGAAPV WAAIVGYLHR DLASRAPRPP
AGVEQRRVAF ERDVEPARPE WFIAGTALDT VRLAAPATAA AGGADRPRAP LSIGAPTDGT
IFAIDPDIPP KHQRIWFERA AGRAARFSWR LDGKVIGRGE RLAWMPWPGS HRLELVDARG
NVADAVGFEV RGAFAKTAAP PKP
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