Gene BURPS668_A1168 details

Gene Information

• Locus tag: BURPS668_A1168
• ID: 4885720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: +
• Start bp: 1107827
• End bp: 1112944
• Gene Length: 5118 bp
• Protein Length: 1705 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640131107
• Product: surface-exposed protein
• Protein accession: YP_001062165
• Protein GI: 126444937
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATAAGA TTTATCGCAA GGTTTGGAAC AAGGCGCGCG GCCAACTGGT CGTCGCGTCG 
GAACTGGCAT CCAGCCGTTC CGGTGTGGGA GAAGCTTCGG TCGACGCGGG GCGGTCTGGA 
GATCGGACAG CCTCGGCGGC ATTCGCCAGC GAGGAGCGCA AACCTGGCTC AGGCCGGATG 
ATTCCGCTTG CAATAGCCGT GGCTCTGACG TTTTCACCCT ACGCATGGGC GGGTGTCGGC 
GGAGCCGACA ACGGCGTGAC GGGGACGAGC AACAACGGCG GGGTAGGCGG CTCGTCCGGC 
GGCGGCGGTG TCCAGTTCAG CGACATGGGC GTGGCCTTTG TCGGCGATGG CGACTGCTCG 
ATGCTCACGT CCGGGCCGGG ATCGTATGCC GGCGTATACG GTTCGGGGAG CAATTATCTG 
GGCGGCCTGT TCGGCTTCGG CGCACAGACG TCGGCCGTCG GCTGGGGGAC GCCCAGCAAC 
GCCGGCGCCA ACAGCGGTAT CGTCCCATAC CAGGGCGCTG CTCAAACCTT CGGCAACGTC 
ACCTATGCCG GCAACGGCAC GCAGAGCGGC AACTTCACGC AGGCGTTCGG CCTGAATTCC 
TTTGCGGTCG GCTGCGGCGC TCACGCGACC GGCCTGAGCG CGACGGCGAT CGGCTGGGGA 
ACCACCGCGA GCGGCGCCGG AAGCGTCGCG CTCGGGCTGT ACAGCACCGC GAGCGGCCAG 
GGATCGTTGG CGTTCGGCAC CAGCGCGACG GCGACGGCCA CCGACACCAT CGCGCTCGGC 
ACGCTGGCCA CGGCCAACGC GGTCAGCGGC GTGGCGATCG GCGCGAACAC GCAGGCTTCG 
GCCGCCAATG CAACCGCGAT CGGCGGCAAT TCATCCGGCG CCAACCTCGG CGCGCAGGCG 
ACGGCGGCCG GCGCCACCGC GATCGGCGGC AACGCGACGG CCGGGGCCGC CGCGACGGCG 
ACGAACGCCA TCGCGATCGG CGGGCAGTCG TCGGCGAAGG ATGCGAACGA TGTGGCCGTG 
GGCGTGGGCG CGAGGGCCGG CACGGGAAGC GGCGCGGGCA ACGATCTCGC GATCGGCAAT 
GGCGCGACGG CCACGGGCGG CAATTCGATC GCCCAGGGCG CGGGCGCGAG CGCCAATGCG 
GCCGGCGCGG TGGCCATCGG CAAATCGGCG TCCGCCGCCG GCGGGCAAGC CGTTTCGATC 
GGCGTGGCCA ATACCGCGTC GGGCAACGGC GCGGTGGCGA TCGGCGATCC GAACGTCGCG 
ACCGGAACCG GCGCTGTCGC GCTGGGCAAC AACAATACGG CCAATGGTCA AGGCGCGGTG 
GCGCTGGGCA ACGTCAGCAC GGCGGTCGGC CAAGGCAGCG TGGCGCTCGG CAACAGCAGC 
AATGCGGCCG CGGCGGGCGG AGTGGCCTTG GGCGATACCG CGAGCGCGGT GATGGCGGGC 
GGCTTGGCAC TCGGCTCGCT CGCGACGGCG AGCAATGCGA ACGACGTGGC GCTCGGCGCG 
GGTTCGAAAA CCGCCGCGGC AGTCGCGACG TCCACGGTTT CGGTGAACGG CGCCAACTAC 
GCGGTGGCGG GAAGCGGCCC GGCCAGCACG GTCAGCGTGG GTGCGCCGGG CAGCGAGCGC 
ACGATCACCA ATGTGGCCGC GGGTCAAGTA AGCGCCGGTT CCACCGATGC GGTGAATGGT 
TCGGAACTGT ACGCGACGAA CCAGGCAATC ACGACCGGAT TGTCGACAGC GAACAGCAGC 
ATCGCGTCGC TGTCCACGTC GACGTCGACG GGTCTTTCGA GCGCCAACAG CAACATCGGC 
TCGTTGTCGA CGGGTTTGTC GACCGCCAAC AGCACGGTTG CGTCGTTGTC GACGTCCACG 
GTTGCCGGCC TGAATTCGCT GTCCACCGGA TTGAGCACGA CCAATAGCAA TGTCGCGTCG 
CTGTCGAGTT CCACGTCGAC GGGGCTGTCC TCGGCCAATA GCGCGGTGGC GTCGCTGTCC 
ACGTCGGCGT CGACGGGTCT TTCGAGCGCC AACAGCAACA TCGGCTCGTT GTCGACGGGC 
TTGTCGACCA CGAACAGCAC GGTTGCGTCG TTGTCGACGT CCACGGTTGC CGGCCTGAAT 
TCGCTGTCCA CCGGATTGAG CACGACCAAT AGCAATGTCG CGTCGCTGTC GAGTTCCACG 
TCGACGGGAT TGTCCTCGGC CAATAGCGCG GTGGTGTCGC TGTCCACGTC GGCGTCGACG 
GGTCTCTCGA GCGCCAACAG CAACCTCGGC TCGTTGTCGA CGGGTTTGTC GACCACGAAC 
AGCACGGTTG CGTCGTTGTC GAGCTCGACG TCGACCGGTA TCGGTTCGTT GTCGACGGGG 
GTGGCCAATT CTGTCCAGTA TGACAGTCCT GCTCATACGT CCATTACCCT GGGTGGCGCC 
AGTGCAACGT CACCCGTGAA GATCACTAAT TTGGCGGCGG GCGCGAACCC GAGCGATGCC 
GTCAACTATG AGCAACTGAC ATCGTTGTCG ACCTCGGCGT CGACGGGACT GTCGTCGGCC 
AACAGCGCGA TCACGTCGCT GTCCACCTCG ACGTCGACCG GCATCGGCTC GCTGTCCACC 
GGACTGAGCA CGACCAACAG CAACGTCGCG TCGTTGTCGA CCTCGGCGTC GACGGGACTG 
TCCTCGGCCA ACAGCGCGAT CACGTCGCTG TCCACCTCGA CGTCGACCGG CATCGGCTCG 
CTGTCCACCG GACTGAGCAC GACCAACAGC AACGTCGCGT CGTTGTCGAC CTCGGCGTCG 
ACGGGACTGT CCTCGGCCAA CAGCGCGATC ACGTCGCTGT CCACCTCGAC GTCGACCGGC 
ATCGGCTCGT TGTCCACCGG ACTGAGCACG ACCAACAGCA ACGTCGCGTC GTTGTCGACG 
TCGGCGTCGA CGGGACTGTC GTCGGCCAAC AGCGCGATCA CGTCGCTATC CACCTCGACG 
TCGACCGGCA TCGGCTCGCT GTCCACCGGG TTGAGCACGA CCAACAGCAA CGTCGCGTCG 
TTGTCGACGT CGGCGTCGAC GGGACTGTCG TCGGCCAACA GCGCGATCAC GTCGCTGTCC 
ACCTCGACGT CGACCGGCAT CGGTTCGCTG TCCACCGGAC TGAGCACGAC CAACAGCAAC 
GTCGCATCGT TGTCGACGTC GGCGTCGACA GGATTATCCT CGGCCAACAG CGCGATCACG 
TCGCTGTCCA CCTCGACGTC GACCGGCATC GGCTCGCTGT CCACCGGACT GAGCACGACC 
AACAGCAACG TCGCGTCGCT GTCGACGTCG GCGTCGACGG GACTGTCGTC GGCCAACAGC 
GCGATCACGT CGCTATCCAC CTCGACGTCG ACCGGCATCG GTTCGCTGTC CACCGGGTTG 
AGCACGACCA ACAGCAACCT GAGCTTCCTG TCCACGTCGA GCTCGACCGG CCTGAGTACG 
GCCAACAGCA ACATCTCGTC GCTGTCCACC GGGCTGAATT CGCTGTCGAC CGCGGTCAAC 
GGCGGCGGGA CGAAGTACTT CCACGCCAAC TCGACGCAGC CGGACAGTCA GGCGCTGGGG 
GCGGATTCCG TCGCGGTCGG GCCGGCGGCC ATCGCGGCGG GCGCAAGCGG CATTGCGATC 
GGCAATGCGG CGAACGCGGC CGCAAACGGC GCCGTCGCGA TCGGCCAGGC CGCCGTCGCG 
AAGGGCGGGC TGGCTGTCTC GATCGGGGTG TCGAACACGG CGAGCGGAGA CGGCGCGGTG 
GCGATCGGCG ATCCGAACGT CGCGACCGGC ACCGGCGCGG TCGCGCTTGG CGCGGACAAT 
TCGGCAAACG GCCAGGGCGC CGTCGCGCTC GGCAACGCGA ACATCGCAAC CGGAACGGGC 
TCGCTTGCGT TCGGCAACAC GTCGACGGCG GCAGCGGCGG GCGCGGTCGC GTTGGGCGCC 
GGCGCAATCG CGAACAATGC GAACGATGTC GCGCTGGGTT CCGCTAGCGT GACCGCGGCT 
GCGAATCCGG TGGCCAGCGC GTTGATCGCA GGTCAGGCTT ATTCGCTTGC CGGCGGCGCG 
CCGGCGAGCG TGGTGAGCGT CGGCGCGCCC GGCGCCGAAC GGCAAATCAC CAACGTCGCG 
GCCGGGCGGA TTTCCGCCAC GTCGACCGAT GCGGTGAACG GCTCGCAGAT GAATGCGATG 
ACTCAGGCGC TGGAATCGCT GTCGACTTCG ACGGCCAGCG CGCTGTCCAC GGCGCAAAGC 
GGTCTGGGTT CGTTGTCGAC GGGGCTCAGC TCGACGCAGA GCAGCGTGAG TTCGCTGTCG 
ACGGGGCTCA GCACGACGAG CGGCAGTGTG GCGTCGCTGT CGAGCGGTCT GGGCACGATG 
CAAAGCGGTA TCGCGTCGCT GTCCACGGGG CTGAGCACGA CGAACAGCAG CCTCGCGTCG 
CTGTCGACCG CCGTGTCCGG CGGCGGTGTT CGCACCAGCA GCTTGGGCGA CACGTCGGCG 
GGCAATGGCG CGAACGCGTC CGGCGGCAAC GGCACGGCGG TCGGCGGCGC CGCGTCCGCT 
TCGGGAACCG ATGCGACCGC GCTGGGCCAG GCGTCGAACG CGTCGGGCAA TCATTCGACC 
GCATTGGGGC AAGCATCGAG CGCGTCCGGA AGCGGCTCCA CCGCGGTGGG ACAAGGCGCC 
GGCGCGCCCG GCGACGGCGC TTCGGCATTC GGCCAAGGGG CACTTGCCTC CGGTACGGAC 
TCGACGGCGC TCGGCGCTCA TTCGACGGCT GCGGCGCCGA ACTCGGCGGC GATCGGCGCG 
AATTCGGTGG CGTCCGCGCC GAATTCGGTG TCGTTCGGTT CGCGGGGCCA TGAGCGCAGG 
CTGACGAATG TCGCGCCGGG GATCGACGGC ACCGACGCGG CGAACATGAA CCAGCTCTGG 
GGCGTGCAAT CGAGCGTCGA TCAGGCGGCG CGCCGCGCCT ATTCCGGGGT GGCGGCCGCG 
ACCGCGCTGA CGATGATTCC GGAGGTCGAC CCCGGCAAGA CGATCGCGGT CGGGATCGGC 
GCGGGCAGCT ATCAAGGGTA TTCGGCGTCC GCGATCGGCG TGTCCGTGCG GTTCTCCGAC 
AACCTGAAGG CGAAGCTCGG CGTGGGGATC AGCGCTCAGG GCAGCACATA TGGCGCAGGC 
GTCTCGTACC AGTGGTAG 

 

Protein sequence

MNKIYRKVWN KARGQLVVAS ELASSRSGVG EASVDAGRSG DRTASAAFAS EERKPGSGRM 
IPLAIAVALT FSPYAWAGVG GADNGVTGTS NNGGVGGSSG GGGVQFSDMG VAFVGDGDCS 
MLTSGPGSYA GVYGSGSNYL GGLFGFGAQT SAVGWGTPSN AGANSGIVPY QGAAQTFGNV 
TYAGNGTQSG NFTQAFGLNS FAVGCGAHAT GLSATAIGWG TTASGAGSVA LGLYSTASGQ 
GSLAFGTSAT ATATDTIALG TLATANAVSG VAIGANTQAS AANATAIGGN SSGANLGAQA 
TAAGATAIGG NATAGAAATA TNAIAIGGQS SAKDANDVAV GVGARAGTGS GAGNDLAIGN 
GATATGGNSI AQGAGASANA AGAVAIGKSA SAAGGQAVSI GVANTASGNG AVAIGDPNVA 
TGTGAVALGN NNTANGQGAV ALGNVSTAVG QGSVALGNSS NAAAAGGVAL GDTASAVMAG 
GLALGSLATA SNANDVALGA GSKTAAAVAT STVSVNGANY AVAGSGPAST VSVGAPGSER 
TITNVAAGQV SAGSTDAVNG SELYATNQAI TTGLSTANSS IASLSTSTST GLSSANSNIG 
SLSTGLSTAN STVASLSTST VAGLNSLSTG LSTTNSNVAS LSSSTSTGLS SANSAVASLS 
TSASTGLSSA NSNIGSLSTG LSTTNSTVAS LSTSTVAGLN SLSTGLSTTN SNVASLSSST 
STGLSSANSA VVSLSTSAST GLSSANSNLG SLSTGLSTTN STVASLSSST STGIGSLSTG 
VANSVQYDSP AHTSITLGGA SATSPVKITN LAAGANPSDA VNYEQLTSLS TSASTGLSSA 
NSAITSLSTS TSTGIGSLST GLSTTNSNVA SLSTSASTGL SSANSAITSL STSTSTGIGS 
LSTGLSTTNS NVASLSTSAS TGLSSANSAI TSLSTSTSTG IGSLSTGLST TNSNVASLST 
SASTGLSSAN SAITSLSTST STGIGSLSTG LSTTNSNVAS LSTSASTGLS SANSAITSLS 
TSTSTGIGSL STGLSTTNSN VASLSTSAST GLSSANSAIT SLSTSTSTGI GSLSTGLSTT 
NSNVASLSTS ASTGLSSANS AITSLSTSTS TGIGSLSTGL STTNSNLSFL STSSSTGLST 
ANSNISSLST GLNSLSTAVN GGGTKYFHAN STQPDSQALG ADSVAVGPAA IAAGASGIAI 
GNAANAAANG AVAIGQAAVA KGGLAVSIGV SNTASGDGAV AIGDPNVATG TGAVALGADN 
SANGQGAVAL GNANIATGTG SLAFGNTSTA AAAGAVALGA GAIANNANDV ALGSASVTAA 
ANPVASALIA GQAYSLAGGA PASVVSVGAP GAERQITNVA AGRISATSTD AVNGSQMNAM 
TQALESLSTS TASALSTAQS GLGSLSTGLS STQSSVSSLS TGLSTTSGSV ASLSSGLGTM 
QSGIASLSTG LSTTNSSLAS LSTAVSGGGV RTSSLGDTSA GNGANASGGN GTAVGGAASA 
SGTDATALGQ ASNASGNHST ALGQASSASG SGSTAVGQGA GAPGDGASAF GQGALASGTD 
STALGAHSTA AAPNSAAIGA NSVASAPNSV SFGSRGHERR LTNVAPGIDG TDAANMNQLW 
GVQSSVDQAA RRAYSGVAAA TALTMIPEVD PGKTIAVGIG AGSYQGYSAS AIGVSVRFSD 
NLKAKLGVGI SAQGSTYGAG VSYQW