| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1159 |
|---|
| Symbol | |
|---|
| ID | 4885699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1102894 |
|---|
| End bp | 1103637 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640131098 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_001062156 |
|---|
| Protein GI | 126444877 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAA GACTGGCTGG CAAGACGGCG CTCGTCACGG CCGCCGCGCA GGGCATCGGC
CGAGCGTCGG CCGAGCGGCT CGCGCGCGAG GGCGCGCGCG TGATCGCGAC GGACATCCGC
ATCGACGCGC TGCGCGACGG CCCGTTCGAT GCGCGCGTGC TCGACGTGCG CGACGGCGCG
GCGATCGACG CGCTCGCCGA TGCGATCGGC CCCGTCGACG TGCTGTTCAA TTGCGCGGGC
TTCGTGCACG CGGGCTCGGT GCTCGACGCG ACCGAAGACG AATGGGACTT CGGCTTCGAT
CTGAACGTGA AGTCGATGTA CCGGACGATC CGCGCGTTCC TGCCCGCGAT GCTCGCGCGC
GAGCGCGGCT CGATCATCAA CATGGCGTCG GCCGCCTCGA GCGTGAAGGG CGTGCCGAAC
CGGTTCGTCT ACGGCGCGAC GAAGGCGGCC GTGATCGGCT TGACGAAAGC GGTCGCGGCC
GATTTCGTCA CGCACGGGAT TCGCTGCAAC GCGATTTGCC CCGGCACCGT CGAATCGCCG
TCGCTCGATG CGCGCATCGC CGAGCAGGCG CGCGCGCGCG GCGAGCCGAT CGACGCGGTG
CGCGCCGCAT TCGTCGCGCG CCAGCCGATG GCGCGCATCG GCAGGCCGCA GGAGATCGCG
GCGCTTGTCG CGTATCTCGC GTCCGACGAG GCGTCGTTCA CGACGGGGGC GATCCATCTG
ATCGACGGCG GCTGGTCGAA CTGA
|
|---|
| Protein sequence | MEARLAGKTA LVTAAAQGIG RASAERLARE GARVIATDIR IDALRDGPFD ARVLDVRDGA
AIDALADAIG PVDVLFNCAG FVHAGSVLDA TEDEWDFGFD LNVKSMYRTI RAFLPAMLAR
ERGSIINMAS AASSVKGVPN RFVYGATKAA VIGLTKAVAA DFVTHGIRCN AICPGTVESP
SLDARIAEQA RARGEPIDAV RAAFVARQPM ARIGRPQEIA ALVAYLASDE ASFTTGAIHL
IDGGWSN
|
|---|
| |