| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1153 |
|---|
| Symbol | |
|---|
| ID | 4887001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1097404 |
|---|
| End bp | 1098960 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640131092 |
|---|
| Product | ABC-type sugar transport system, ATPase component |
|---|
| Protein accession | YP_001062150 |
|---|
| Protein GI | 126445211 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA TCGCCGCCGT CACCGCGCGC GCCTGCACCG ACGCCGGCGC GCCCGTCGTC
GAGGCGCGCG CGCTCACGAA GCGCTTCGGC CCGCACATCG CGCTCGCGGA CGTCGACCTG
TGCGTGCGGG CGGGCGAGTC GCACGCGCTC GTCGGCCGCA ACGGCGCGGG CAAGTCGACG
CTCGTGTCGA TCCTCACCGG GCTGCGCAAG CCGGACGCGG GCGTCGTGCG CTTCGCCGGC
GAGGCGGCGC CGCCGCTCGC CGATCGCGAC GGCTGGCGCG CGCGCGTCGC ATGCGTGTAC
CAGCATTCGA CGATCATCCG CGAGCTGACC GTCGCCGAGA ACCTGTTCAT CAACCGGCAG
CCGACGAAGC GCGGCGCGAT CGACTGGCGC GCGCTGCGGC GCGACGCGCG CGCGCTGCTC
GAGCACTGGC GCATCGACGT CGGCGAGAAC GCGCGCGCGG GCGACCTGAC GGTGGAGGCG
CGCCAGCTCG TCGAGATCGC GCGGGCGCTG TCTTACGGCG CGCGCTTCAT CGTCCTCGAC
GAGCCGACCG CGCAGTTGGA CGGCGACGAG ATCAAGCGGC TGTTCGCGCG AATTCGCGAG
CTACAGCGCG ACGGCGTGAC GTTTCTGTTC ATCTCGCATC ACCTGCAGGA GGTGTACGAC
ATCTGCCAGG CGGTGACGGT GTTGCGCGAC GCGCGGCGCA TCGTCAGCGC GCCCGTCGCG
GCGCTGCCGC GCGACGCGCT GATCGAGGCG ATGACCGGCG AGCGCGGCGC TCTCGCGGTG
GCCGACGCCG CGCGGCGCGC GCCGCCGCCG GACGACGCGC CGCGCGCGCT CGAAGTCGAC
GGTCTCGCGG GCGACGATTA CGAGCGCGTG TCGTTTTGCG TGCGGCGCGG CGAGGTGGTC
GGGCTCGCCG GCGCGACGAG CAGCGGCCGC ACGAGCGTCG CGGAGGCGGT GGCCGGCTTG
CGCGCGCCGC GCGCGGGCGC GGTCCGCGTC GACGGCGCCG CGCTGCCGCC CGCCGACGTG
AGCGCCGCGC TCGCGCGCGG CGTCGGCTGC GTGCCGAAGG ATCGCCATCG CGAAGGGCTC
GTGCTCGGCG AATCGGTGGC GGAGAACGCA TCGATGACGA TCGCGGGCGC GCTCGGGCGC
CTGGGGCGCT TCGGGCTCGT GCCGCCCGCG AGAAAGCACG CGTTCGGCGC GCGGATGATC
GACGCGCTCG GCATCGTCGC GCAGGGGCCG CGGCAGCCGG TGTCGGGCCT GTCGGGCGGC
AATCAGCAGA AGGTGGTGAT GGCGCGCGCG CTCGCGAACG ATCCGCGCGT GCTCGTGCTG
ATCGATCCGA CCGCGGGCGT CGACGTGAAA TCGAAAGAGG CGCTGCTCGC CGTCGTCGAG
CGGGTACGCG GCGGCGGCGC GGCGGTGCTC GTCGCCTCGG GCGAGCTCGA CGATCTGCGC
ACCTGCGACC GCGTGCTCGT GATGTTCCGC GGGCGCATCG TCGCCGAATT TCAGGCCGGC
TGGCAGGACA ACGAACTGAT TGCATCCATC GAAGGAGTCG GCGCCCATGA AGTCTAG
|
|---|
| Protein sequence | MNAIAAVTAR ACTDAGAPVV EARALTKRFG PHIALADVDL CVRAGESHAL VGRNGAGKST
LVSILTGLRK PDAGVVRFAG EAAPPLADRD GWRARVACVY QHSTIIRELT VAENLFINRQ
PTKRGAIDWR ALRRDARALL EHWRIDVGEN ARAGDLTVEA RQLVEIARAL SYGARFIVLD
EPTAQLDGDE IKRLFARIRE LQRDGVTFLF ISHHLQEVYD ICQAVTVLRD ARRIVSAPVA
ALPRDALIEA MTGERGALAV ADAARRAPPP DDAPRALEVD GLAGDDYERV SFCVRRGEVV
GLAGATSSGR TSVAEAVAGL RAPRAGAVRV DGAALPPADV SAALARGVGC VPKDRHREGL
VLGESVAENA SMTIAGALGR LGRFGLVPPA RKHAFGARMI DALGIVAQGP RQPVSGLSGG
NQQKVVMARA LANDPRVLVL IDPTAGVDVK SKEALLAVVE RVRGGGAAVL VASGELDDLR
TCDRVLVMFR GRIVAEFQAG WQDNELIASI EGVGAHEV
|
|---|
| |