| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1106 |
|---|
| Symbol | |
|---|
| ID | 4887996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1061622 |
|---|
| End bp | 1063031 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640131046 |
|---|
| Product | amino acid permease |
|---|
| Protein accession | YP_001062105 |
|---|
| Protein GI | 126442415 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGA TATCGGAGTC TTCGAGCGCG GCGGCGGCCG CCGCACCGGG CGGCGCGCGC
GCGCCGGACA CGCTCGCGCG TTCGCTCAAC GTGCGCGATG TGGTGATGAT CACGGTGTCG
GGCGTGACGC CCGCGAGCTC GATTTTCGTG ATCGCGCCGT TCGCGATCCA GCAGGCGGGC
AGCGGCGCGG TGATGTCGTT CGTGCTCGGC GGGCTGCTCG CGTTCGCGTT CGCGCTCTGC
TATGCGGAAC TGAGCGCCGC GCACCGCAGC GCGGGCGGCG AGTACGTGAT GGTCAAGCGC
GTGTTCGGTG CGCTGCCCGG GTATCTGACG TTCGTCGCGG TGCTCGCCGT CAACGTGTTC
ATTCCGGCCG TGCTCGCGAG CGGCGCCGCG CCTTACCTGA ACGCGGCGCT CGGCACGCAG
CTCGGCAATC AGTCCGTGGC GCTCGCGATC GTGCTCGCGA GCTATGCGTT GGGTATCCTG
AACATTCGCA CGAACGCGTG GATCACCGGC GCGTTTCTCG TGATCGAGAT CCTCGTGCTC
GCGCTGATCG CGTATCTCGG CTTCTCCGAG CCGCATCGCT CGCCACTCGC GCTCGTGCAT
CCCGTCGTCG CGAACGGCGC GGCGCTCGTG CCCGCGACGC TCGCCGCGAT CATGCCGGCC
GTCGGCACGG CGATCTTCTG TTACAACGGC TTCGGCGCGG CCGTGTTTCT CGCCGAGGAT
CTCGAAGGCG GCAATCGCGA CATCGCGAAG GCGGTGATCT GCTCGCTCGC GGTGATCCTC
GTCGTCGAGC TCGTGCCGCT CACCGCGATC GTGCTCGGCG CGCCGTCGTT CGTCGAGCTC
GCGAAGAGCG CCGATCCGAT CGGCTATGTC GTGCGCGCGC TCAGCAATCC GGATGTGTCG
CGCGTCGTGA GCGGCGGCAT CTTCCTGTCC GTGTTCAATG CGATCATCGC GATCGTCATC
ATGGTCGGGC GCTTCCTGTA CAGCAGCGGG CGCCATGCGT TGTGGTCGCA TGCGTGCAAC
GGCGCGTTCA CGCGCATTCA TCCGCGCCTC GAATCGCCAT GGATCGCGAC GCTCACGCTC
GCGGTGCCGT CGACGCTGCT CGTGTTCGTG TCGAGCCTCG ACGCGCTGAC CGCGTTCACC
GTCGATCTGC TGCTGCTCGT CTATCTCGCC GTCGGCGTCG CGGCGCTCGC GAGCCGCGTG
ATGCGGCGCG ACGTCGATCA TCATTACCGG ATGCCGTGGT GGCCGCTGCC GCCCATTGTC
GCGATCGCGG GCGCCGGGTA TACGCTGTAC ACGACGATCG CCGCCGCGAC GAAGCCGACC
GACCTGTACA TCATCGCCGG GCTCGCGGCT GTCTCGCTCG CGGCCTACGC GCGCTGGGCG
CGCCGCAGCG CGGCGTTTCG CGAACTCTGA
|
|---|
| Protein sequence | MAMISESSSA AAAAAPGGAR APDTLARSLN VRDVVMITVS GVTPASSIFV IAPFAIQQAG
SGAVMSFVLG GLLAFAFALC YAELSAAHRS AGGEYVMVKR VFGALPGYLT FVAVLAVNVF
IPAVLASGAA PYLNAALGTQ LGNQSVALAI VLASYALGIL NIRTNAWITG AFLVIEILVL
ALIAYLGFSE PHRSPLALVH PVVANGAALV PATLAAIMPA VGTAIFCYNG FGAAVFLAED
LEGGNRDIAK AVICSLAVIL VVELVPLTAI VLGAPSFVEL AKSADPIGYV VRALSNPDVS
RVVSGGIFLS VFNAIIAIVI MVGRFLYSSG RHALWSHACN GAFTRIHPRL ESPWIATLTL
AVPSTLLVFV SSLDALTAFT VDLLLLVYLA VGVAALASRV MRRDVDHHYR MPWWPLPPIV
AIAGAGYTLY TTIAAATKPT DLYIIAGLAA VSLAAYARWA RRSAAFREL
|
|---|
| |