| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1097 |
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| Symbol | mmsA |
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| ID | 4886669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 1053386 |
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| End bp | 1054981 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640131037 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001062096 |
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| Protein GI | 126442504 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.856592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTTC CTCGCGCGCG CGCCGGCGCC GGCGGCGCGA CCCATCCCAC GCAACATACG
AATTCAGGAA ACACCGCGAT GAAACACGAC AGCAACGTCA CTTCCCCCCT CGGCCATCTG
ATCGACGGCA AGCGCGTCGA CGGCGGCGAG CGCGTCCAGC CCGTGTTCGA TCCGGCGACG
GGCGCATCGA CGAAGCGCGT CCGCATGGCC GACCGCCCGA GCGTCGAGGC GGCGATCGCC
GCCGCGCAGG CCGCGTATCC GGCCTGGCGC AACACGCCGC CGCTCAAGCG CGCGCGGGTG
ATGAGCCGCT TCAAGACGCT GCTCGAGGAG CACGCGAACG AGCTGTGCGC GCTGATCACG
GCCGAGCACG GCAAGGTGCT CGCCGATGCG ATGGGCGAGT TGCAGCGCGG GATCGAGAAC
GTCGAGTACG CGAGCTACGC GCCCGAGCTG CTCAAGGGCG AGCACAGCAA GAACGTCGGC
CCGGCGATCG ACTCGTGGAG CGAGTTCCAG GCGCTCGGCG TGGTGGCGGG GATCACGCCG
TTCAATTTCC CGATCATGGT GCCGCTGTGG ATGTGGCCGA TGGCTGTCGC GTGCGGCAAC
ACGTTCGTGC TGAAGCCTTC CGAGCGCACG CCGTCGTCGA CGCTGCGCAT GGCCGAGCTC
GCGCTCGAAG CGGGCCTGCC GCCGGGTGTG CTGAACGTCG TGAACGGCGA CAAGGAAGCC
GTCGACACGA TCCTGACCGA TTCGCGCGTG AAGGCGGTGA GCTTCGTCGG CTCGACGCCG
ATCGCCGAGT CCATCTACGC GACGGGCTGC GCGCACGGCA AGCGCGTGCA GGCGCTGGGC
GGCGCGAAGA ACTTCGCGAT CGTGATGCCG GACGCCGACA TCGGCAACGC GGTCAACGCG
CTGATGGGCG CGGCGTACGG TTCGTGCGGC GAGCGGTGCA TGGCGATTCC GCTCGTCGTC
GCGATCGGCG ACGACACGGC GGAGCAGGTC GTCGACGGCC TGAAGGCCGA GATCGCGAAG
ATGAAGGTCG GCCCGGGCAC GGGCGAGCAG GTCGACATGG GGCCGCTCGT CACGCGGCAG
CACTTCGAGA AGGTGACGGG CTTCGTCGAG GCGGGCATCG CCGCGGGCGC GACGCTCGTC
GTCGACGGGC GCGGCGTGAA GGTGGACGGC CACGAAGGCG GCTATTACCT CGGCCCGTGC
CTGTTCGATC ACGTGAAGCC CGGCATGCCG ATCTATCAGC ACGAGATCTT CGGGCCGGTG
CTGGGCGTCG TGCGCGTCGC GTCGCTCGCC GAGGCGATGG CGCTCGTCGA CGCGCACGAG
TACGGCAACG GCACGTGCCT CTTCACGCGC GACGGCGAGG CCGCGCGCTT TTTCAGCGAC
AACATCCAGG TCGGGATGGT CGGCATCAAC GTGCCGCTGC CCGTGCCCGT TGCTTATCAC
TCGTTCGGCG GCTGGAAGCG CTCGCTGTTC GGCGATCTGC ACGCATACGG ACCCGACGCG
GTGCGCTTCT ATACGAAGCG CAAGACGATC ACGCAGCGCT GGCCGTCGGC CGGCGTGCGC
GAGGGGACGG TGTTCAGCTT CCCGTCGAGC CGCTGA
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| Protein sequence | MRVPRARAGA GGATHPTQHT NSGNTAMKHD SNVTSPLGHL IDGKRVDGGE RVQPVFDPAT
GASTKRVRMA DRPSVEAAIA AAQAAYPAWR NTPPLKRARV MSRFKTLLEE HANELCALIT
AEHGKVLADA MGELQRGIEN VEYASYAPEL LKGEHSKNVG PAIDSWSEFQ ALGVVAGITP
FNFPIMVPLW MWPMAVACGN TFVLKPSERT PSSTLRMAEL ALEAGLPPGV LNVVNGDKEA
VDTILTDSRV KAVSFVGSTP IAESIYATGC AHGKRVQALG GAKNFAIVMP DADIGNAVNA
LMGAAYGSCG ERCMAIPLVV AIGDDTAEQV VDGLKAEIAK MKVGPGTGEQ VDMGPLVTRQ
HFEKVTGFVE AGIAAGATLV VDGRGVKVDG HEGGYYLGPC LFDHVKPGMP IYQHEIFGPV
LGVVRVASLA EAMALVDAHE YGNGTCLFTR DGEAARFFSD NIQVGMVGIN VPLPVPVAYH
SFGGWKRSLF GDLHAYGPDA VRFYTKRKTI TQRWPSAGVR EGTVFSFPSS R
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