| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1081 |
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| Symbol | |
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| ID | 4885724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 1039395 |
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| End bp | 1041254 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640131021 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001062080 |
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| Protein GI | 126444944 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.566614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCC CACCGTTTCT TTCATCGCCC AAGCGCGCGC TGCCGATCGC GCTCGCGCTC
GGCCTCGCCG GTTGCTCGAT GGAGCCGGCC TACCAGCGGC CCGATGCGCC GATGCCGTCC
GCGTATCCGA ACGGCCCCGC CTACGCGACG CCGGGCGCGC CGCGCGCGAA CCCGGGCGAG
CCGGCGGCGG CCGAGCTCGG CTGGCGGAAT TTCCTCGCCG ACGCGCAGTT GCAGCAGCTC
GTCGCGCTCG CGCTCGCGAA CAACCGCGAC CTGCGCGTCG CGACGCTCGA CATCGACGAA
GCGCGCGCGC TGTACCGCAT CCAGCGCGCC GCGCAGTTTC CCGCAATCGA TGCGAGCGTC
GGACTCACGA GCCAGCGCAT GAGCCCCGCG CTGCGCGCGC CGGGGCAGTC CGCGGCGATC
AACAGCTATG ACGCGAGCGT CGGCCTCACC CATTTCGAGA TCGACCTGTT CGGCCGCATG
CGCAGCCTGA GCCACGCCGC GCAGGAGCAA TACCTCGCGA CCGAGGAGGC GCGGCGCAGC
GTCCACATCA GCCTCGTCGC CGAAGTCGCG AACACCTACC TGACGCTGCT CGCCGATCGC
GCGCTGCTCG CGCTCGCGCA GGACACGCTC AGGAGCCAGC AGGACGCCGC CGACATGATC
CACCGCGGCA AGCAGGCGGG CGCGATGGCG CAGCTCGACG AGCATCGCGC GGACACGCAG
GTGCAGACCG CACGCGTCGC CGCCGAGCAA TACACGCGGC AGATCGCGCA GGACGAGAAC
GCGCTTGCCG TGCTGATCGG CGGGCCGCTG CCGGCCGGCG TGTCGCGCGC GGCGCCGCTC
GACGATCGCG CGCTGCTCGC GGAGTTCCCG GCGGGCCTGC CGTCGACGCT GCTCGAGCGC
CGCCCCGACA TCATGGCCGC CGAGCATCGG CTCATCGCCG CGAACGCGAA TATCGGCGCG
GCGCGCGCGG CGTTCTTCCC GAGGATCACG TTGACGGGCG CGCTCGGCGT GGCGAGCGCG
AGCCTCGCGG GGCTGTTCTC CGGCGGCGTC GCGTGGCTGT TCGTGCCGCA GCTCACGCTG
CCGATCTTCA ACGCGGGCAG CAATCAGGCG AATCTCGATC TCGCGACGGT GCGCCGCGAC
ATCAACGTGG CCGGCTACGA GCACACGATC CAGGACGCGT TCCGCGAGGT CGCCGACAAC
CTGGCCGCAC GCGCGACCTA CGAGCGGGAA GTGAAAGCGC AGGAGGCGAT GATCCGCGAC
CTGGCCGAGA CGAAGCGGCT GGCCGACATG CGTTTTCGCA ACGGCGTCGA CGACTACTTC
GGCGTGTTCG ATGCGCAACG CCAGCTGTTC GCCGCGCAGC AACTGCTCGT CACCTACAAG
CTTGCCGGGC TGACGAGCCG CGTGACGCTA TACAAGGCGC TCGGCGGCGG CTGGGTCGAG
TCGGCGGGCG CGGTGGCCGC GCAACCGCGG ACGGGGCCGG CCGCGCCGAT GGCTCGCCCG
GCAGCCACTC CCCCCCAGAC GACGCGACCC GCGCCGGTTG CTCGATCGCA GACGGTTCCA
CCGCGAACGG TTCAGCCCCC GATCGCCCAA CCGGCAACCG CGCAACCGCA AACGGCGCAA
GCCGCGCCGG TTGCTCAGTC GCAGACGATT CCACTGCGAA CGGTCCAGCC TCCTATCGCC
CAATCGTCAA CCTCTCAACC GCAAACGGCG CAAGCCGCGC CGATCACTCA AGCGCGGACG
ACACCACTCC GAACGGCTCA GCCGCCTGCC GCTCGACAAC AGGCGCCGCA ATCCGCTCCG
GCGGTTCAAC CGGAGGCAGC TCCACCGCAA ACGGCCCAAC CGCCGATTTT TCAGCCGTAA
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| Protein sequence | MHSPPFLSSP KRALPIALAL GLAGCSMEPA YQRPDAPMPS AYPNGPAYAT PGAPRANPGE
PAAAELGWRN FLADAQLQQL VALALANNRD LRVATLDIDE ARALYRIQRA AQFPAIDASV
GLTSQRMSPA LRAPGQSAAI NSYDASVGLT HFEIDLFGRM RSLSHAAQEQ YLATEEARRS
VHISLVAEVA NTYLTLLADR ALLALAQDTL RSQQDAADMI HRGKQAGAMA QLDEHRADTQ
VQTARVAAEQ YTRQIAQDEN ALAVLIGGPL PAGVSRAAPL DDRALLAEFP AGLPSTLLER
RPDIMAAEHR LIAANANIGA ARAAFFPRIT LTGALGVASA SLAGLFSGGV AWLFVPQLTL
PIFNAGSNQA NLDLATVRRD INVAGYEHTI QDAFREVADN LAARATYERE VKAQEAMIRD
LAETKRLADM RFRNGVDDYF GVFDAQRQLF AAQQLLVTYK LAGLTSRVTL YKALGGGWVE
SAGAVAAQPR TGPAAPMARP AATPPQTTRP APVARSQTVP PRTVQPPIAQ PATAQPQTAQ
AAPVAQSQTI PLRTVQPPIA QSSTSQPQTA QAAPITQART TPLRTAQPPA ARQQAPQSAP
AVQPEAAPPQ TAQPPIFQP
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