Gene BURPS668_A0988 details

Gene Information

• Locus tag: BURPS668_A0988
• ID: 4887219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: -
• Start bp: 957620
• End bp: 959605
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640130928
• Product: collagenase
• Protein accession: YP_001061987
• Protein GI: 126442357

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.244986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTATAC ATGATCATCA ATCATATTCA CGACAACAAA GGGCAAATAT GAAAAATTCC 
CGCAATGTCG TCAATCGTTT TATTGTCGCC GCTTCTATTA TCATTGGAGT CGTTCTTTAC 
AGTTCCGCTT GGGCAAATCC GCAGCCCATG CATACGAAGC AGGCACGTAT GCCGCGTATC 
CCGCAGAATC TCCCGCTTTC ACCAGACCAA GCCAAATACG ACCTGCCGCT CAGCAAGTAT 
GACCGCGCAA CGCTGATGGA GCCGTTGCGG CGGAAGCAAT CAGCGAAACC CGACAGGCGC 
ACCCGGCCTG GAGCAGATTG CCGCGACATG TCAATAATGA CGCAATATCA CGGCACGGCG 
CTTGCTGATT ACATAGCAAA CCTCCCGGAT TATGAGTGCC ACTACGGACT ATTCTCGATT 
GACAGGGCGA TGGCCGCGCA GATTTTCAAT TCTGAAAACG TGTGGGCTGT TGCCAGCCGT 
CTCACTCAAG AAATCAATCG TTACGACGCA ACAAATATTA CATTGGTAAA TTTGCTTATT 
TATCTGAGAG CCGCTTATTT CCAATATGAC GCAGCCCAGC TTGCTGATCC GGTTCCCGGT 
CTCGTAGTCT GGCTGCGTCC GTATATTTTG CAGAGCCTCT CTGGCGACGC GCTTTACCTC 
GAGAATTCAC GCGCGCCGAG CACCGCCAAC GAGCTGATGA TCCTAATCAC AAACATGAAG 
GACGAGGCGT ACTACCTGCC AACGCTGAAG GACCGAATCG CGTTCTACAC CGCGAGCGCG 
ACCAACCCTC AGGCTGCGGC GCCGCTACTG CAGCGAAGCG CGGCGGGTGG CTTCACCGGC 
TTGCTCACGG TGTTCTTCTA CGCGCATCAG CGCAGCGGCG CTCAGCCGAT GCTCGATAGC 
GATGCGACTC TGCCGGAGAC GCTCAACCGC TTCGTCACGG CGAACCGCGC ATACCTGTCG 
AACACCAGTG CCGCCTATCA GCTCGCCGAT GCGGCGCGCG AAACGTACCG CTTTCTCCGC 
TATCCGTCGC AGAAGCCGCG GGTGAAGAAA ATGATTCAGG ATATGCTCGC GTCGACTACC 
ATGACGGGCC CGGACAACGA CCTGTGGCTC GCGGCAGCGG AAGCAGCCGA TTACGGCGAT 
CCCGGCAACT GCGCAGATTA CGGCACGTGC GACTATCAGA AGCGGCTCAT CGAGGCAGTG 
CTCACGCATC GGTACTCATG CAATGCGAAC GTACGAATTC TCGCGCAGGA CATGACGGTG 
CCGCAATTCC AGTCGGCATG CCAATCGGTC GCCCAGGAGG AGGACTATTT CCACAGGATG 
ATGAAGACAG GGCACGTACC GGTCGCGAAC GATCACAATG ACACGATCGA AATAGTCGTA 
TTCGGCGACT ACGACAATTA TCGGAAGTAC GCTTCGGTGA TCTACGGAAT TAGCACCGAT 
AACGGCGGCA TGTACGTTGA AGGCGATCCG TCGGCACCCG GCAATCAGGC GCGCTTCATC 
GCGCACGAGG CTTCGTGGCT ACGGCCGGAG TTCAAGGTCT GGAACCTTGA GCACGAGTTT 
ACGCACTATC TCGACGGCCG TTACGACATG GCGGGCGACT TCGCGGCGAG CACGGCGAAG 
CCCACCGTGT GGTGGATCGA GGGTCTTGCC GAATATATCT CCAGAAAGAA CGATGACCAG 
GAATCGATCG ACGCGGTGCG CACGAACGCA TATCGGCTCT CGGACGTGCT TCAGACGACT 
TATTCGTCCG GCGACTATGT CACGCGCGCG TATCGATGGG GTTATATGGC GACGCGCTTC 
ATGTTTGAAC GTCATCGCAC GGACGTCGAC GCGATCGTGT CACGTTTTCG CGTGGGCGAT 
TACGACGGTT ACGCGGACTA TGTCGCGTAC ATGGGCAACC GCTATGACAG CGAGTTTGTT 
GACTGGGCAC GCGGCGCGAC AACAACCGGT GAGCCGCCGT TGCCGCCAAC GAAAGCGGGG 
CATTGA 

 

Protein sequence

MTIHDHQSYS RQQRANMKNS RNVVNRFIVA ASIIIGVVLY SSAWANPQPM HTKQARMPRI 
PQNLPLSPDQ AKYDLPLSKY DRATLMEPLR RKQSAKPDRR TRPGADCRDM SIMTQYHGTA 
LADYIANLPD YECHYGLFSI DRAMAAQIFN SENVWAVASR LTQEINRYDA TNITLVNLLI 
YLRAAYFQYD AAQLADPVPG LVVWLRPYIL QSLSGDALYL ENSRAPSTAN ELMILITNMK 
DEAYYLPTLK DRIAFYTASA TNPQAAAPLL QRSAAGGFTG LLTVFFYAHQ RSGAQPMLDS 
DATLPETLNR FVTANRAYLS NTSAAYQLAD AARETYRFLR YPSQKPRVKK MIQDMLASTT 
MTGPDNDLWL AAAEAADYGD PGNCADYGTC DYQKRLIEAV LTHRYSCNAN VRILAQDMTV 
PQFQSACQSV AQEEDYFHRM MKTGHVPVAN DHNDTIEIVV FGDYDNYRKY ASVIYGISTD 
NGGMYVEGDP SAPGNQARFI AHEASWLRPE FKVWNLEHEF THYLDGRYDM AGDFAASTAK 
PTVWWIEGLA EYISRKNDDQ ESIDAVRTNA YRLSDVLQTT YSSGDYVTRA YRWGYMATRF 
MFERHRTDVD AIVSRFRVGD YDGYADYVAY MGNRYDSEFV DWARGATTTG EPPLPPTKAG 
H