Gene BURPS668_A0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0959 
Symbol 
ID4888274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp933540 
End bp934400 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content70% 
IMG OID640130899 
ProductRpiR family phosphosugar-binding transcriptional regulator 
Protein accessionYP_001061958 
Protein GI126443744 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00212362 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG ATTTCGACGA ACTCGCGTCC CTGATTCGGG CGCAATTTTC CGAGCTGAGC 
CCGCAATTCC AGGTGGGCGC GGCGTTCCTG CTCGATCATC CCGACGAGGT GGCCGTGTCG
TCGATGCGCA AGGTCGCGCA GCGCGCGAAT GTGCAGCCGG CCTCGCTCGT GCGGCTCGCG
CAGCAGTTCG GCTTTCCGGG CTGGAACGAA CTGCGCGACC TGTTCGTCGC GCGCGTGCGC
ACGCGGCCGC AGCCGCTCAC GCAGCGCGCG CGCTCGCTCG TGAAGCCGAA TGCGAAGGCA
TCGCTCGCGG CCGATCTGCT CGCCGCGCAG CGGCACAACC TCGAGGCGAG CGCCGCGCAG
AACGCGCGGG CGCTCGCCGA GGCGGCGAAG CTGATCCGCA AGGCCGCGCA CGTGCATGTC
GCGGGCTTCC GCTCGTGCTA CCCGGTCGCG TTCGGGTTCG TCTACGGCTA TCGGCTGTTC
CGGCCGACGG TGTCGCTGCT CACGGGCGTC GCGGGCTCGC TCGACATGGA GCTGCGCACG
ATCGCGAAGA ACAGCGTGAC CGTGGTCGTC AGCTTCGCGC CGTATTCGGC CGAAGCGACG
CGCGTCGCGC AGGCGGCGCG CGCGCAGGGC GGCAGGATCG TCGCGATCAC CGACAGCGCG
GTGTCGCCGA TCGCGCTGCA CGCGGATGCG CAACTGATCT TCACGCACGA CAGCCCGTCG
TTCTTCCCGT CGCTCGTCGC CGCGCATGCG CTCGTGGAGA CGCTCGTCGC ACAACTGCTC
GCGCTCGAGG GCGGCGAGGC GATCGCGGCG CTCGAGCAGG CCGAGGCCGA ATTGCACGCG
AAGGGCGCCT ACGTCGTCTG A
 
Protein sequence
MPADFDELAS LIRAQFSELS PQFQVGAAFL LDHPDEVAVS SMRKVAQRAN VQPASLVRLA 
QQFGFPGWNE LRDLFVARVR TRPQPLTQRA RSLVKPNAKA SLAADLLAAQ RHNLEASAAQ
NARALAEAAK LIRKAAHVHV AGFRSCYPVA FGFVYGYRLF RPTVSLLTGV AGSLDMELRT
IAKNSVTVVV SFAPYSAEAT RVAQAARAQG GRIVAITDSA VSPIALHADA QLIFTHDSPS
FFPSLVAAHA LVETLVAQLL ALEGGEAIAA LEQAEAELHA KGAYVV