| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0920 |
|---|
| Symbol | mmsA |
|---|
| ID | 4885865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 901130 |
|---|
| End bp | 902731 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640130860 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001061919 |
|---|
| Protein GI | 126442999 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCGG CGTGCCGCTT CGCATCAACC GGCCGGCGGC GCGCCGCCGG CCATAGCCAG
GAGAATCTCA CGATGAACGC AACTCCGTCG TCCCGGAAGG GACATCATGT GCCGACCGTG
AAACTGTTGA TCGCCGGCGA ATTCGTCGAA TCCCATGCGA CCGAGTGGCG CGACATCGTC
AACCCGGCGA CTCAGGAACT GCTCGCGCGC GTGCCGTTCT CGACCGTGGC CGAAGTCGGC
GCGGCCGTCG AGGCCGCGCA TGCCGCGTTC GCGAAATGGA AGAGCACGCC GATCTCCGCG
CGCATGCGCA TCATGCTGAA GTTCCAGGAT CTCGTGCGCG CGAACCTGCC GCAGATCGCG
AAGACGCTGA CGGCCGAGCA GGGCAAGACG CTGCCCGACG CCGAAGGCGA CGTGTTCCGC
GGCCTCGAGG TGGTCGAGCA CGCGTGCTCG GTCGGCACGC TGCAACTGGG CGAGTTCGCG
GAGAACGTCG CGGGCGGCGT CGATACGTAC ACGCTGCGCC AGCCGCTCGG CGTGTGCGTC
GGCATCACGC CGTTCAACTT CCCCGCGATG ATCCCGCTAT GGATGTTCCC GATGGCGATC
GTCTGCGGCA ACACGTTCGT GCTGAAGCCG TCCGAGCAGG ATCCGCTGTC GACGATGCAG
CTCGTCGAGC TCGCGATCGA GGCGGGCGTG CCGAAGGGCG TGCTCAACGT CGTGCACGGC
GGCAAGGAAG TCGTCGACGC GCTGTGCTCG CATCCGCTCG TGAAGGCGAT TTCGTTCGTC
GGCTCGACGG CCGTCGGCAC GCACGTGTAC CGGCTCGGCA GCGAGCACGG CAAGCGCGTG
CAATCGATGA TGGGCGCGAA GAACCATGCG GTGATCCTGC CCGATGCGAA CCGCGAGCAG
ACGGTGAACG CGCTCGTCGG CGCGGCGTTC GGCGCGGCGG GCCAGCGCTG CATGGCGACT
TCGGTCGCGG TGCTCGTCGG CGCGGCGCGC GACTGGCTGC CCGACATCGT CGCGAAAGCG
AAGACGCTGA AGGTCAACGC GGGCGCGGAA GCGGGCACCG ACGTCGGCCC CCTGGTGTCG
CGCGCGGCGA AGCAGCGGGT GCTCGGCCTC ATCGAGACCG GCGAACAGGA AGGCGCGAGG
CTCGTGCTCG ACGGCCGCGG CGTGAGCGTG CCCGGCTATG AGCACGGCAA TTTCGTCGGC
CCGACGATCT TCGCGGACGT GAGGCCGGAG ATGTCGGTCT ACACGCATGA AATCTTCGGC
CCGGTGCTGT GCGTGATGTC GGTCGACACG CTCGACGAGG CGATCGCGCT CGTCAACGCG
AATCCGTTCG GCAACGGCGT CGGCCTGTTC ACGCAGAGCG GCGCGGCCGC GCGCAAGTTC
CAGAGCGAGA TCGACATCGG CCAGGTCGGC ATCAACATTC CGATTCCGGT GCCGGTGCCG
TTCTTCAGCT TCACGGGCTC GCGCGGCTCG AAGCTCGGCG ATCTCGGCCC GTACGGCAAG
CAGGTCGTGC AGTTCTACAC GCAGACGAAG ACCGTCACCG CGCGCTGGTT CGACGACGAT
GCGACGGCGG GCGCCGTCAA CACGACGATT CGCCTGCACT GA
|
|---|
| Protein sequence | MTPACRFAST GRRRAAGHSQ ENLTMNATPS SRKGHHVPTV KLLIAGEFVE SHATEWRDIV
NPATQELLAR VPFSTVAEVG AAVEAAHAAF AKWKSTPISA RMRIMLKFQD LVRANLPQIA
KTLTAEQGKT LPDAEGDVFR GLEVVEHACS VGTLQLGEFA ENVAGGVDTY TLRQPLGVCV
GITPFNFPAM IPLWMFPMAI VCGNTFVLKP SEQDPLSTMQ LVELAIEAGV PKGVLNVVHG
GKEVVDALCS HPLVKAISFV GSTAVGTHVY RLGSEHGKRV QSMMGAKNHA VILPDANREQ
TVNALVGAAF GAAGQRCMAT SVAVLVGAAR DWLPDIVAKA KTLKVNAGAE AGTDVGPLVS
RAAKQRVLGL IETGEQEGAR LVLDGRGVSV PGYEHGNFVG PTIFADVRPE MSVYTHEIFG
PVLCVMSVDT LDEAIALVNA NPFGNGVGLF TQSGAAARKF QSEIDIGQVG INIPIPVPVP
FFSFTGSRGS KLGDLGPYGK QVVQFYTQTK TVTARWFDDD ATAGAVNTTI RLH
|
|---|
| |