| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0915 |
|---|
| Symbol | |
|---|
| ID | 4888892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 894154 |
|---|
| End bp | 894927 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640130855 |
|---|
| Product | SPFH domain-containing protein |
|---|
| Protein accession | YP_001061914 |
|---|
| Protein GI | 126445324 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.323341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGTT TCACGTTCGG TTTCGGCAGC CTGCTGTTCG TATTCGCGCT GTTCCTCGTC
GCCTCGTCGA TCCGGATCTT TCGCGAGTAC GAGCGCGGTG TCGTGTTCCT GCTCGGGCGC
TTCTGGAAGG TCAAGGGGCC GGGGCTCGTG CTGATCGTGC CCGTCATCCA GCAGGCGGTG
CGCATCGACT TGCGCACCGT CGTGTTCGAC GTGCCGGCGC AGGACGTGAT CACGCGCGAC
AACGTATCGG TGAAGGTAAG CGCGGTCGTG TATTTTCGCG TGGTCGACCC CGAGAAGGCG
GTGATCCAGG TCGCCCGCTA TTTCGACGCG ACGAGCCAGC TCGCGCAGAC GACGCTGCGC
GCGGTGCTCG GCAAGCACGA GCTCGACGCG CTGCTCGCCG AGCGCGAGCA GTTGAACGCC
GACATCCAGA AGACGCTCGA TGCGCAAACC GATGCGTGGG GAATCAAGGT GTCGACGGTC
GAGATCAAGC ACGTCGACCT GAACGAGACG ATGATCCGCG CGATCGCGCG CCAGGCGGAA
GCCGAGCGCG AGCGGCGCGC GAAGGTGATT CATGCGGAGG GCGAGCTGCA GGCGTCCGAG
CAGTTGCTGA AGGCCGCGCA GCGGCTCGCG CTGCAGCCGC AGGCGATGCA GTTGCGCTAT
CTGCAGACGC TCACGACGAT CGCCGCCGAC AAGAACTCGA CGATCGTGTT CCCGCTGCCG
ATCGATCTGC TCAGCTCGGT GCTCGAACGC TTCGGGCGCG CGCCGCAGCA GTGA
|
|---|
| Protein sequence | MMGFTFGFGS LLFVFALFLV ASSIRIFREY ERGVVFLLGR FWKVKGPGLV LIVPVIQQAV
RIDLRTVVFD VPAQDVITRD NVSVKVSAVV YFRVVDPEKA VIQVARYFDA TSQLAQTTLR
AVLGKHELDA LLAEREQLNA DIQKTLDAQT DAWGIKVSTV EIKHVDLNET MIRAIARQAE
AERERRAKVI HAEGELQASE QLLKAAQRLA LQPQAMQLRY LQTLTTIAAD KNSTIVFPLP
IDLLSSVLER FGRAPQQ
|
|---|
| |