| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0909 |
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| Symbol | ppd |
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| ID | 4888196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 887332 |
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| End bp | 888570 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640130849 |
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| Product | phosphonopyruvate decarboxylase |
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| Protein accession | YP_001061908 |
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| Protein GI | 126443039 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGG AAGACCTGAT CGGCATACTG ACCGATGCCG GCGTCGATCT CGCGGTCGGC
GTTCCAGATT CCTTACTGAA ACCGTTCTGC GGCCGGCTGA ACGATCCGGA TTGCCCGCTG
CGCCACCTCG TCGCGAGCAG CGAGGGCGGC GCGGTCGGCA TCGCGATCGG CCACCATCTC
GCAACGGGCG GCCTCGCGGC CGTCTACATG CAGAACTCCG GCATCGGCAA CGCGATCAAC
CCGCTCGTGT CGCTTGCCGA TCGCGCGGTC TATGGGATTC CGCTCGTGCT GATCGTCGGC
TGGCGCGCGG AAATCTCGGC AAGCGGCGCA CAGGTACACG ACGAGCCGCA GCACGTCACG
CAAGGCCGCA TCACGCTGCC GCTGCTCGAC GCGCTGTCGA TCCGCCACCT CGTGCTCGAG
CGTGCCGGCG GCGAAAACGA CGCGCTCGCG CCGTCGATCG CGCCGTCGAT CGCGCAATTG
ATCGCCGGCG CGCGCCAAAC GTCGCAGCCC GTCGCGCTCG TCGTGCGCAA GGACGCGTTC
GACGACGCGA GCGCCTCGCG GCCGCGCGCG GCCGCCCCGC ACGCCGGCCG GATGACCCGC
GAGCAGGCCA TCGCGCTGAT CGTCGAGCAC GCGGACGCAG GCGCGGCGAT CGTCTCGACG
ACGGGCGTCG CCTCGCGCGA GCTGTACGAG CTGCGCGATC GGCTCGGCCA CTCGCACGCG
CGCGATTTCC TGACGGTCGG CGGCATGGGG CACGCGTCGC AGATCGCGGT CGGCATCGCG
CTCGCCCGCC CCGCGCAAAA GGTGATCTGC ATCGACGGCG ACGGCGCGCT GCTGATGCAC
ATGGGCGGCC TCGCGTACTG CGCGGGCGCG CCGAACCTCA CGCACGTCGT CATCAACAAC
GGCGTCCACG ATTCGGTCGG CGGGCAACCC ACGCTCGCCG CGCACTTGCG GCTGTCGCAC
ATCGCGGCGT CGTGCGGCTA CGCGTTCAGC CGCAGCGTCG CGACGCCCAT CGAGCTCGAG
AGCGCGCTGC ATCACGCGAG CCGCCTCGAC GGCAGCGCAT TCATCGAAGT GACGTGCCGC
CCCGGCTATC GCAGCGATCT CGGCCGGCCG CGCACGTCGC CCGCCGAGAA CAAACGCCAT
TTCATGGCCT TCCTATCCCG CAACGGAGCG ACACATGAGC GAGACGATCA CGCGCAGGAA
AGTGGCCTAC AAGACGCTGT CCAGTGCGCT CGGCACTGA
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| Protein sequence | MKTEDLIGIL TDAGVDLAVG VPDSLLKPFC GRLNDPDCPL RHLVASSEGG AVGIAIGHHL
ATGGLAAVYM QNSGIGNAIN PLVSLADRAV YGIPLVLIVG WRAEISASGA QVHDEPQHVT
QGRITLPLLD ALSIRHLVLE RAGGENDALA PSIAPSIAQL IAGARQTSQP VALVVRKDAF
DDASASRPRA AAPHAGRMTR EQAIALIVEH ADAGAAIVST TGVASRELYE LRDRLGHSHA
RDFLTVGGMG HASQIAVGIA LARPAQKVIC IDGDGALLMH MGGLAYCAGA PNLTHVVINN
GVHDSVGGQP TLAAHLRLSH IAASCGYAFS RSVATPIELE SALHHASRLD GSAFIEVTCR
PGYRSDLGRP RTSPAENKRH FMAFLSRNGA THERDDHAQE SGLQDAVQCA RH
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