Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0871 |
Symbol | pchA |
ID | 4887726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 845678 |
End bp | 847156 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640130811 |
Product | salicylate biosynthesis isochorismate synthase |
Protein accession | YP_001061870 |
Protein GI | 126442399 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCGCCGC CAGCGGGGGC TCGCATGAGC GCCCGCCTGT CCGCGCTGCT CAATACGTTC GCGCGCGCCG CGCGCCGCGC GGCCGACACG GGCGAGCCCG TGCTCGCCGC GGCATCGTTT CCGCTGCGGC CGCTGAACCT GTTCGATCTG ATCGCGAGCT GGGACGACGG CGCAACCCCA TGGTGCTTCG TCGAAGCCGG CGACGAGCCG GGCGCGATGC GCGCGCCGGG CAAGCCACCC GCCCTGTTCG GCTGGGATTG CGCACTCGAT CTGAACGAGG CGGGCGACGC GCGATTCGCC CGGCTCGACG CGCGCTGGCG CGCGCTCGTG CGCGCGGCGG TCGTCACCGG CGCGCAGCCG CCGCGCATCG TCGGCGGCTT CCGCTTCGAT CCGCTCGGGC CGCGATACGC GCACTGGCAC GCGTTCGCCG ATGCGAGCAT GACGCTTGCG AAACTGCTGG TCGTCCGCGA AGGCGAGGCG TATTGGGCGG TCTGCCAGCG CGTCGTCGCC GCGCACGACG ATCCCGCCGC GCTCGCGCGC GAATGCGACG CGCGCATCGG CATGCTCGCG TCGCTCGCGC CCGCCGCCGA CGACGAGGCG CCGCGCCTGC TGCGCGTTCA GGCGCTGCAG GCCGCCGCAT GGCAGCACGA GGTGCGGCGC GCGGTCGACG CGATCCGCGG CGAAGCGTTC AGCAAGGTCG TGCTCGCGCG CGACGTGCTG CAACAGTACG CGCGGCCCGT GGCGATCGGG CCGCTGCTGC GCCGGCTCAG GCGGCGCGAC CCGCGCGCGC ACCTGTTCGC GATCCGCAGG CGCGACGGCT GCTTCGTCGG CGCGACGCCG GAACGCCTCG CGCGCGTCGC GCACGGCCAT GCGCACACGC ACGCGCTCGC CGGCACGATC GCGCGCGGCA ACGATCCGGC TCACGATCGC GCGCTCGGCG CGCAGCTGAT GGCGTCGGCG AAAGAGCGCC TCGAGCACGC GCTCGTGGTC GACGCGATTC GCGATGCGCT CGCGCCGCTG TCGCGCGTGA TCGATGTGCC CGCGCAGCCG TCGCTATTGC GGCTGCCGCG CCTGCAACAT CTGAGCACGC CGATCGCCGC GGCGCTGAAC GAGCGCGCGA CGCTGCTGCA AGTCGTCGCG GCGCTGCATC CGACGCCCGC CGTCGCGGGC CATCCCCGCG CCGCCGCGCT CGAGCACATT CGCGCGCACG AAGGCTTCGA TCGCGGCTGG TATGCGGGCC CGATCGGCTG GATCGACGCG CACGGCAACG GCGACTTCGT CGTCGCGCTG CGCTCGGCGC TGATCTCGGC CGGCGCCTGC CGGCTGTTCG CGGGCTGCGG GATCGTCGCC GAATCGGAGC CGGCGCGCGA ATATCGCGAA ACGAGCCTCA AGCTGTCGGG GATGCAGGCG GCGATCGAGG CGCGCGACGC CGCAGCAGCA GCGCGCACGG TCGCGCCGAT TCCGTCCGCC GCGCACTGA
|
Protein sequence | MAPPAGARMS ARLSALLNTF ARAARRAADT GEPVLAAASF PLRPLNLFDL IASWDDGATP WCFVEAGDEP GAMRAPGKPP ALFGWDCALD LNEAGDARFA RLDARWRALV RAAVVTGAQP PRIVGGFRFD PLGPRYAHWH AFADASMTLA KLLVVREGEA YWAVCQRVVA AHDDPAALAR ECDARIGMLA SLAPAADDEA PRLLRVQALQ AAAWQHEVRR AVDAIRGEAF SKVVLARDVL QQYARPVAIG PLLRRLRRRD PRAHLFAIRR RDGCFVGATP ERLARVAHGH AHTHALAGTI ARGNDPAHDR ALGAQLMASA KERLEHALVV DAIRDALAPL SRVIDVPAQP SLLRLPRLQH LSTPIAAALN ERATLLQVVA ALHPTPAVAG HPRAAALEHI RAHEGFDRGW YAGPIGWIDA HGNGDFVVAL RSALISAGAC RLFAGCGIVA ESEPAREYRE TSLKLSGMQA AIEARDAAAA ARTVAPIPSA AH
|
| |