Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0815 |
Symbol | |
ID | 4886942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 791418 |
End bp | 793001 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640130755 |
Product | NodT family efflux transporter outer membrane lipoprotein |
Protein accession | YP_001061814 |
Protein GI | 126442402 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.103865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA CCGCAACGCA CGCAGCCACA CGCACGACGA CCCTGCCGGT CCGCCGCCCG GCGCGCCGGC TCGCGGCGCT TGCGCTCGCC TGGGCGCTCG CCGGCTGCGT GCCGTCGGGC CTGAAGCCGA CGCTCGCGCC GCGCACGCCC GGCGACGACG CGCTCGCGCA CACCACCGGC GGCGCGACGC ACGGCGCATG GCCGAGCCCG GACTGGGTGC GCCAGCTCGG CGATCCGCAG CTCGACGCGC TCGTCGACGA AGCGCTGCGG CAGAACCCGA CGCTGCAGGC CGCGCAGGCG CGCATCGGCG TCGCGCAGTC GCAACTGCAG CAGTTCGAAT CGCTGACGGG GCTCACCGCG ACGGCGGGCG CCTCGCTCTC CAAGGCGCAC GTGCCGCGCT CGGGCGGCAC CCTCAATACG ACGCTGAACG GCTTGCCGGT GTCGGTGCCG CTCGTGGGCG AATCGGTGGT GTCGTCGTCG TCGCTGTTCG TCGGGCTGAA CTATCAGCTG GACCTGTGGG GCAAGAACGC GGCGGCCACG CGCGGGCTGC TGTCGATGCG CGATGCGGCG CGCGTGGAGG CCGAGCAGGC GCGGCTCACG CTGTCGGTGG CGATCGTGAC GCTGTACGGC GAGCTGGACC GCGCGTATGC GCTGCGCGAG CTGCTGCAAC AGAAGCGCCG CGCGAGCGAG CAGGTCGAGG CGGTGCTGCG CGAGCGCGCG GCGCGCGGGA TCGACAACGG CTACGACGCG GACGACGCGG CGCTCAAGCG CGGCAAGCTG CTCGAGCAGA TCGCGCTGAC CGACGAGCAG ATCCAGTTGC AGAGGCTGCA GCTGGGCGTG CTGAGCGGAC GGGGGCCGGA GCGCGGGCTG TCGCTCGCGC GGCCGAAGCT CGCGCCGCTC GCGGACGCGC CGCTGCCCGC GCGGCTGCCG GCCGGGCTGC TGGGGCGGCG GCCGGACATC GTCGCGGCGC GATTGCGGGT GGAGGCGGCG TACGCGGCGA TCGACGGCAC GCGCGCGTCG TTCTACCCGG ACGTGAACCT GGCGGCGCTG GGCGGGCTGT TCGCGCTCAC GCCGGCGTCG CTGTTCAGGC ACGATGCGCT GGGCGGCTCG ATCGGGCCGG CGCTGTCGCT GCCGATCTTC GATCGCAGCC GGCTGAAGGC GAAGCTGGGC GGCGACGTGG CGAACGCGGA CATGGCGCTC GCGCTGTACA ACCAGACGGT GGATGCGGCG CTGGGCGAGG TGGCGCGGCA GTTGACGTCG CTGGCGACGC TCGACACGCT GCTGAAGGCG CAGCAGCAGG CGCTGCGCGC GGCGCAGCGG ATGGTGGCGC TGGCGCAGGA CCGGCATCGC CGGGGGATGG GGATGCGCAA GGACATCGAC GTGGCGCAGC TCACGCTGCT GGACGAGCGC GCGCACGTGG TGGAGCTGCA GGCGCGGCGG CGCACGCTGC GGGTGGGGCT GATCGGCGCG CTGGGCGGCG GCTTCGACGC GCGGCCGGCG AGCAGTGCGC CGCCCGGGCA GGCGGGCCAG CCGTTCGCGG CGGCGTCGCG GCCGGTGGCG GCGCACGATG CGCAACCTGA TTGA
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Protein sequence | MTQTATHAAT RTTTLPVRRP ARRLAALALA WALAGCVPSG LKPTLAPRTP GDDALAHTTG GATHGAWPSP DWVRQLGDPQ LDALVDEALR QNPTLQAAQA RIGVAQSQLQ QFESLTGLTA TAGASLSKAH VPRSGGTLNT TLNGLPVSVP LVGESVVSSS SLFVGLNYQL DLWGKNAAAT RGLLSMRDAA RVEAEQARLT LSVAIVTLYG ELDRAYALRE LLQQKRRASE QVEAVLRERA ARGIDNGYDA DDAALKRGKL LEQIALTDEQ IQLQRLQLGV LSGRGPERGL SLARPKLAPL ADAPLPARLP AGLLGRRPDI VAARLRVEAA YAAIDGTRAS FYPDVNLAAL GGLFALTPAS LFRHDALGGS IGPALSLPIF DRSRLKAKLG GDVANADMAL ALYNQTVDAA LGEVARQLTS LATLDTLLKA QQQALRAAQR MVALAQDRHR RGMGMRKDID VAQLTLLDER AHVVELQARR RTLRVGLIGA LGGGFDARPA SSAPPGQAGQ PFAAASRPVA AHDAQPD
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