| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0796 |
|---|
| Symbol | |
|---|
| ID | 4887710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 767451 |
|---|
| End bp | 769742 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640130736 |
|---|
| Product | Rhs element Vgr protein |
|---|
| Protein accession | YP_001061795 |
|---|
| Protein GI | 126442945 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGA TCGAACTGCG CAGTCCCCTG CTGGACCCGG ATGCGGTGGC GCTGAGCTTC
GTGGTGCACG AGAGCTTGTC GCAGGAGCCG TCGTATCAAC TGGATCTGCT GAGCCACGAT
CCGGATCTGG ACTTCGACGC GCTGCTCGGC TCGACGCTGT CGGCCGACAT CGACCTGGGC
GAAGGCGACA TCCGGACGTT CAACACGCAC GTGTTCGGCG GCTACGACAC GGGGCAGATG
AGCGGGCAAT ACACGTACAC GCTGGAGCTG CGAAGCTGGC TGTCGTTTCT CGCGGAGAAC
CGCAACAGCC GGATCTTCCA GAACATGAGC GTGCCGCAGA TCGTCGAGCA GGTGTTCCAG
GGCCATCAGC GCAACGGCTA CCGGTTCGAG CTCGAAGGCA CGTACGAGCC GCGCGAGTAC
TGCGTGCAGT TTCAGGAAAC GGATCTGAAC TTCGTGAAGC GGCTGCTGGA GGACGAAGGG
ATCTACTTCT GGGTGGAGCA CGAGCCGGAT CGTCATGTGG TGGTGATCTC GGACACGCAG
CGGTTCGAGG ATCTGCCGCT GCCGAACGAC ACGCTGGAGT ATCTGCCGGA CGGCGAGGAG
TCGCGCGCGA TCCAGGGGCG CGAAGGGGTG CAGCGGCTGC AGCGCACGCG GCGGATCAAG
TCGAACAACG TCGCGCTGCG GGATTTCGAC TATCACGCGC CGTCGAACAA GCTCGACAGC
GACGCGCAGC AGGTGTCGCC GCCGAACCTC GAAGGGATTC CGCTCGAGTA TTACGACTAT
GCGGCCGGCT ACCGCGAGCC CGAGCAGGGC GAGCGTCTCG CGCGGCTGCG GCTCGAGGCG
ATTCAGGCGG AATCACACAC GCTGGTGGGC GAGGCGAACG CGCGCGCGCT GGCCACGGGC
CGGGCGTTCA CGTTGATCGG GCATCCGGCG TTGGGGCGCA ATCGTCGGTA CTACGTGACG
AACAGCGAGC TGACGTTCAT CCAGGACGGA CCGGACAGCA CGTCGCAGGG GCGCAACGTC
GCGGTGAAGT TCCGCGCGCT TGCCGACGAT CAGCCGTTTC GGCCGCTGTT GACGACGCCG
CGTCCCGAAG TGCCGGGCAT CCAGAGCGCG ACGGTGGTGG GTCCGGAGAT GTCGGAAGTG
CATACCGACA AGCTCGGGCG GATTCGCGTG CATTTCCATT GGGACCGCTA CAAGACGACC
GAGGCGGATG CGTCGTGCTG GATACGCGTG TCGCAGGCAT GGGCGGGCAA GGGCTGGGGC
GTGATCGCGA TGCCGCGGGT CGGGCAGGAA GTGCTCGTCA CGTATGTCGA CGGCGATCTC
GATCGGCCGC TCGTGACGGG CATCGTCTAC AACGGCGAGA ACCCGACGCC TTATGACTTG
CCGAAGGACA TCCGCTACAC GGGGCTGGTG TCGCGTTCGA TCAAGCGTGC GGGCGGTTAT
CAGAACGCGA GTCAGATCAC GTTCGATGAC CAGCGCGGCG CGGAGCGCGT GATGATCCAC
GCGGAGCGCG ACATGCAGCA GACGGTCGAG CGCAACAGCT CGACGTCGAT CGCGCAGGAT
CTGAACCTGT CGGTGAAGGG CACGTCGACG TCGGTCGTCG GCATCTCGAT CAGCTTCACG
GGCATCTCGG TGTCGTACAC GGGGTTGTCG GTGAGCTTCA CCGGCGTGTC GGCGAGCTTC
ACGGGCTTGA GCACGTCGTT TACCGGCGTG AGCACGAGTT TCACCGGCGT GTCGACGTCG
TTTACCGGCG TCGACACCAG CTTCAAGGGC GTGTCGACGT CGTTTACCGG TGTCGATACC
AGCTTCAAGG GGGTGTCGAC TTCGTTCACG GGCGTAAGCA CGAGCCTCAC CGGTTCGAGC
AACTCGGTGA CGGGCGTATC GAACAGCATG ACGGGCATCT CGTCATCATG GACCGACGTC
AGCATGTCGA CGACCGGCCA ATCCCAAAGC ATCACGGGGG TATCGCTGTC GTACACGGGC
ACGTCGAACA GCATGACGGG CACGAGCACG TCGGTGACGG GCACCTCGAC GAGCATCACC
GGCACGTCGA TGTCGAACAC CGGCAGCTCG ACGAGCATCA CGGGCACGTC GATGTCGACG
ACGGGCAGCT CGACGAGCGT CACCGGCTCG AGCGTATCGA CGACCGGCAG CTCGGTGAGC
ACGACGGGCT CGAGCGTGTC GACAACGGGC AGCAGCGTGT CGACGACAGG TTTCAGCTTC
TCGTACACCG GCGTCAGCTA TTCGGACACC GGTATCGACC TGAAGAAGGT CGGCATGCAA
GTGAAGAGCT GA
|
|---|
| Protein sequence | MRLIELRSPL LDPDAVALSF VVHESLSQEP SYQLDLLSHD PDLDFDALLG STLSADIDLG
EGDIRTFNTH VFGGYDTGQM SGQYTYTLEL RSWLSFLAEN RNSRIFQNMS VPQIVEQVFQ
GHQRNGYRFE LEGTYEPREY CVQFQETDLN FVKRLLEDEG IYFWVEHEPD RHVVVISDTQ
RFEDLPLPND TLEYLPDGEE SRAIQGREGV QRLQRTRRIK SNNVALRDFD YHAPSNKLDS
DAQQVSPPNL EGIPLEYYDY AAGYREPEQG ERLARLRLEA IQAESHTLVG EANARALATG
RAFTLIGHPA LGRNRRYYVT NSELTFIQDG PDSTSQGRNV AVKFRALADD QPFRPLLTTP
RPEVPGIQSA TVVGPEMSEV HTDKLGRIRV HFHWDRYKTT EADASCWIRV SQAWAGKGWG
VIAMPRVGQE VLVTYVDGDL DRPLVTGIVY NGENPTPYDL PKDIRYTGLV SRSIKRAGGY
QNASQITFDD QRGAERVMIH AERDMQQTVE RNSSTSIAQD LNLSVKGTST SVVGISISFT
GISVSYTGLS VSFTGVSASF TGLSTSFTGV STSFTGVSTS FTGVDTSFKG VSTSFTGVDT
SFKGVSTSFT GVSTSLTGSS NSVTGVSNSM TGISSSWTDV SMSTTGQSQS ITGVSLSYTG
TSNSMTGTST SVTGTSTSIT GTSMSNTGSS TSITGTSMST TGSSTSVTGS SVSTTGSSVS
TTGSSVSTTG SSVSTTGFSF SYTGVSYSDT GIDLKKVGMQ VKS
|
|---|
| |