| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0726 |
|---|
| Symbol | potF |
|---|
| ID | 4887238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 691859 |
|---|
| End bp | 693088 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640130666 |
|---|
| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
|---|
| Protein accession | YP_001061725 |
|---|
| Protein GI | 126445558 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGATCGA TGCGACGGCG CAGCAACTGG GTCTTTCCTA ACGGCATTGC CAATCGGGCA
GGCGGCGCGC GGGCGCCGCG CGCCCACCTT CATCATCAGG GGAACAACAT GAGTGTGAGC
CATCTTCGTC ATGCGGTCGC GCGCGCAGCG CTCGTCGCGC TCGCCGGCGC GTCGGCGCTC
GCCCTGCCGG CCGCGCACGC GGCCGGCGCC GAGCTGAACG TGTACAACTG GTCGGACTAC
ATCGCGAAAG ACACGATCCC GAACTTCGAG AAGCAATCCG GCATCCACGT CAAGTACGAC
AACTACGACA GCGACGACAC GCTGCAGGCG AAGCTGCTCG CGGGCAGCTC CGGCTACGAC
ATCGTCGTGC CGACGTCGAA CTACATGGCC AAGCAGATTC AGGCGGGCGT CTACCAGAAG
CTCGACAAAT CGAAGCTGCC GAACCTGTCG AACCTCGATC CGACGCTGAT GAAGATGATC
GCCGACGCCG ATCCGGGCAA CCAGTACGGC GTGCCGTGGG CGTTCGGCAC CGACGGCCTC
GGCTACAACG TGCAGGCGGT GAAGAAGGCG CTCGGCGAGA ACGCGCCCGT CGACAGCTGG
GCGCTCGTGC TCGATCCGGC CAACGTATCC AAGCTCAAGG GCTGCGGCGT ATCGTTCCTC
GATCAGGCGG TCGACGTGTT CGCCGCGACG CTGCAATACA TGGGCAGGAA TCCGAACAGC
ACAAACCCGG CCGATTACCA GGCGGCGTTC GAGGTGCTGA AGAAAGTCCG CCCGTACATC
ACGCAATTCA ACTCGTCCGG CTACATCAAC GATCTCGCGA ACAACGACGT ATGCGTCGCG
CTCGGCTGGT CGGGCGACGT CGGCATCGCG CATCGCCGCT CGGCCGAGGC GAAGCGCCCG
TACGACATCA AGTTCTCGAA TCCGAAGGAA GGCGGCCTGC TGTGGTTCGA CGTGATGGTG
ATCCCGAAGG ATGCGCCGCA CGCGGAAGCC GCGCTGAAGT GGATCAACTA CATCGAGGAC
CCGAAGGTCA ACGCGGCGAT CACCAACGAA GTGTTCTACC CGAGCGCGAA CCGCGCGGCG
CGACAGTTCG TCGTGCCCGC CGTCGCGCAG GATCCGACCG TCTACCCGCC CGAGGACGTG
CTCAAGAAGA TGACGCTGAT GCGGCCGATG CCCGCCGACA TCCTGCGGCT CGAGAACCGT
CTGTGGGCGC AATTGAAGAC GGGACACTGA
|
|---|
| Protein sequence | MRSMRRRSNW VFPNGIANRA GGARAPRAHL HHQGNNMSVS HLRHAVARAA LVALAGASAL
ALPAAHAAGA ELNVYNWSDY IAKDTIPNFE KQSGIHVKYD NYDSDDTLQA KLLAGSSGYD
IVVPTSNYMA KQIQAGVYQK LDKSKLPNLS NLDPTLMKMI ADADPGNQYG VPWAFGTDGL
GYNVQAVKKA LGENAPVDSW ALVLDPANVS KLKGCGVSFL DQAVDVFAAT LQYMGRNPNS
TNPADYQAAF EVLKKVRPYI TQFNSSGYIN DLANNDVCVA LGWSGDVGIA HRRSAEAKRP
YDIKFSNPKE GGLLWFDVMV IPKDAPHAEA ALKWINYIED PKVNAAITNE VFYPSANRAA
RQFVVPAVAQ DPTVYPPEDV LKKMTLMRPM PADILRLENR LWAQLKTGH
|
|---|
| |