Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0724 |
Symbol | potH |
ID | 4887840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 689538 |
End bp | 690518 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640130664 |
Product | putrescine ABC transporter, permease protein PotH |
Protein accession | YP_001061723 |
Protein GI | 126443933 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACCT CTCCCTCCTC CCCGCTCGCG GCGGCCGCGC CCGCCGCACG CAGCGCGTTC TCCGCGCGCG CGCGCGCCGC GCGCGTCGCG GCGCGCTTCA CGCCGTCCGG GCGCAGCGTC GCGATCGGCG TGCCGTTCCT CTGGCTTGCG CTGTTCTTCG CGTTGCCGTT CGTGCTCGTG CTGAAGATCA GCTTCGCCGA TCAGGTGATG GGCATCCCGC CGTACACGGC GCTGATGGAC GTCAAGGACG GCGCCGTGCG GTTCGCGCTG CAGCTCGGCC ATTACGCGTT CCTGCTGCAG GACAGCCTCT ATGTCGCGAC CTACGTCAGC TCGCTGAAGA TGGCCGCGGT GTCGACGCTC CTGTGCCTGC TGATCGGCTA CCCGATGGCG TACTACATCG CGCGCTGCGC GCCCGCGACG CGCAACCTGC TGATGATGGG CGTGATGCTG CCGTTCTGGA CGTCGTTCCT GATTCGCGTC TATGCATGGA TCGGCATCCT GAAGGACGAC GGCCTGCTGA ACCACGCGCT GATCGCGATC GGCCTGATCC ATTCGCCGCT GCGCCTCTAT CACACCGACG CGGGCGTCTA CATCGGAATG GTCTACTCGT ACCTGCCGTT CATGGTGATG CCGCTCTATG CGCACCTCGT GAAGATGGAC CTCACGCTGC TGGAGGCCGC CTATGACCTC GGCGCGAAGC CGTGGGTCGC GTTCACGCGG ATCACGCTGC CGCTGTCGAA GAACGGCGTC ATCGCGGGCA GCCTGCTCGT GTTCATCCCC GCCGTCGGCG AATACGTGAT CCCCGAGCTG CTCGGCGGCG CCGATACGCT GATGATCGGC CGCGTGATGT GGGACGAGTT CTTCAACAAC ATGGACTGGC CGATGGCCTC CGCGGTGACG GTCGCGATGG TGCTGCTGCT CCTCGTGCCG ATGGCCGTGT TCCAGTACTA CCAGGTGAAG GAACTGGAGG ACGCGAAATG A
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Protein sequence | MRTSPSSPLA AAAPAARSAF SARARAARVA ARFTPSGRSV AIGVPFLWLA LFFALPFVLV LKISFADQVM GIPPYTALMD VKDGAVRFAL QLGHYAFLLQ DSLYVATYVS SLKMAAVSTL LCLLIGYPMA YYIARCAPAT RNLLMMGVML PFWTSFLIRV YAWIGILKDD GLLNHALIAI GLIHSPLRLY HTDAGVYIGM VYSYLPFMVM PLYAHLVKMD LTLLEAAYDL GAKPWVAFTR ITLPLSKNGV IAGSLLVFIP AVGEYVIPEL LGGADTLMIG RVMWDEFFNN MDWPMASAVT VAMVLLLLVP MAVFQYYQVK ELEDAK
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