Gene BURPS668_A0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0684 
Symbol 
ID4885730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp655059 
End bp656261 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content70% 
IMG OID640130624 
Productmajor facilitator family transporter 
Protein accessionYP_001061683 
Protein GI126442843 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.837842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA ACCTTGCCTC TTCCGCCACG GCCGGCCCCG TCCCGCAAAT GGCGCGCGGC 
CTGATCCTGC TGTTCGCGTT CAGTTGCGGC GCGATCGTCG CCAATCTCTA CTACGCGCAG
CCGATCATCG CGCTGATCGC GCCGGACCTG CACATGTCCG GCGGCATGGC GAGCCTCATC
GTGTCGCTCA CGCAGATCGG CTACGCGGCC GGCCTGTTCT TTCTCGTGCC GCTCGGCGAT
CTGGTCGAGA ACAAGAAGCT GATGGTCGTC ACCGCGCTGA CGTCGATCGC GAGCCTCGCG
CTCGCCGCGA CCGTGCGCGC GCCGGGCCTG TTCCTCGCCG TCTCGCTGAT CGTCGGCTTC
AGCTCGGTCG CGGTGCAACT GCTGATTCCG CTCGCCGCGC ACCTCGCGCC GAGCGAATCG
CGCGGGCGCG TCGTCGGCAC GATCATGAGC GGCCTGCTGC TCGGCATCCT GCTGTCGCGC
CCCGTCGCGA GCTTCATCGC CGATCACTTC GGCTGGCGCG CGGTGTTCGC GTTCGGCGCG
GCCACGATGG CGGTCGTCAC CGTGCTGCTG ATGCTGACGG TCCCGAGCCG CCGGCCCGCG
CATCAGGCGA CGTACATGCA ACTGATCCGC TCGCTCGGGC GGCTCGTCGC GACGCAGCCG
GCGCTGCGCG AGCGCTCGCT CTACCAGGGG CTGATGTTCG GTTCGTTCAG CCTGTTCTGG
AGCGCGGCGC CGGTCGAGCT GATGCATCGC CATCATCTGT CGCAATCGGC GATCGCGCTG
TTCTCGCTCG TCGGCGCGAT GGGCGCGAGC TCCGCGCCGA TCGCCGGGCG CCTCGCCGAC
GCCGGCCACA CCGGGCGCGC GACCGTCGTC GCGCTCGGGC TCGCCGCGGC GAGCTTCGCG
CCGGCGCTGT TCGTGCCGGG TGCCGGCGTC GCCGGGCTCG TCGCGACCAG CATCCTGCTC
GACTTCGCGG TGCAGATGAA CATGGTGCTC GGCCAGCGGG AGATCTACGC GCTCGACGCG
CACAGCCGCA ATCGCCTGAA CTCGATCTAC ATGACGAGCA TCTTCGTCGG CGGCGCGATC
GGCTCCGCGC TCGCGAGCGC GCTCTACGAG CACGGCGGCT GGACATGGAT CGCGATCGTC
GGCGCGCTCT TTCCGCTCGC GGCGCTCGCG CGCTTCGCCT TTGCGTCGCG CGCCGCCCGA
TGA
 
Protein sequence
MNANLASSAT AGPVPQMARG LILLFAFSCG AIVANLYYAQ PIIALIAPDL HMSGGMASLI 
VSLTQIGYAA GLFFLVPLGD LVENKKLMVV TALTSIASLA LAATVRAPGL FLAVSLIVGF
SSVAVQLLIP LAAHLAPSES RGRVVGTIMS GLLLGILLSR PVASFIADHF GWRAVFAFGA
ATMAVVTVLL MLTVPSRRPA HQATYMQLIR SLGRLVATQP ALRERSLYQG LMFGSFSLFW
SAAPVELMHR HHLSQSAIAL FSLVGAMGAS SAPIAGRLAD AGHTGRATVV ALGLAAASFA
PALFVPGAGV AGLVATSILL DFAVQMNMVL GQREIYALDA HSRNRLNSIY MTSIFVGGAI
GSALASALYE HGGWTWIAIV GALFPLAALA RFAFASRAAR