Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0587 |
Symbol | phnV |
ID | 4888583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 553615 |
End bp | 554469 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640130527 |
Product | ABC transporter, permease protein |
Protein accession | YP_001061592 |
Protein GI | 126443677 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | [TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000820492 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGCTG ATTTCCCGGC TCGCGCCGCG CCGGTGCCGC GCCGCGAGCT GCGCTGGACC GATGCGGCCT CGCGCGTCGC CTCGCGTGCG CTCGTCGCGC TCGCGGCCGC CGCCTGCTGC TGGCTGTTCG TGCTGCCCGT CGTCGTCGTC GCGCTGTCGA GCGTCGCCGG GCACTGGTCG GGCACGATCC TGCCGGCGGG CTACAGCCTG CGTTGGTTCG AGCGCCTCGG CCGGCCCGAA TTCGACGCGC TCGCCGCGAG CCTCGAGATC GGGCTCGGCG TCGCCGCGCT CGGCACCGCG CTCGGCGTCG CGCTGGCGCT CGCGCTCGAA GGCCGCACGC GGCGCGGCGT CGGTGCGCTC GTCGACGCGC TCGTGATGCT GCCCAACGGC GTGCCGAGCG TCGTGCTCGG GCTCGCGGTG CTAATCGCGT ATCACGCGAA GCCCGTCGAC CTGTCGAGCT CGCCCGCGAT CGTCGTGTTC GTGCAGCTCG CGCTCGTGCT GCCGTTCTGC TACCGGTGCG CGGCCGCCGC GCTGCGCCCC GAGCTGACCG TGCTGCGCGA GGCGGCCGCG AGCCTCGGCG CGCCGCCCGC GATGGTGCTG CGCCGCGTGC TGCTGCCGCA GCTCGTGCCG GCGATCCGCG CGAGCCTCGC GCTCGGCTTC GCGCTGTCGC TCGGCGAGCT CGGCGCGACG CTGACCGTCT ATCCGCCGGG CTTCGCGACC GTGCCGATCG TCGTGATCGG CGCGGTCGAG CGCGGCTACT ACCTGCCCGC GTCGGCGCTG TCGCTGCTGC TGCTCGGCGC GTCGCTCGTC GCGCTCATCG CGATCGCGGC GCGCGCACCG CGGCCGCCGC GATGA
|
Protein sequence | MSADFPARAA PVPRRELRWT DAASRVASRA LVALAAAACC WLFVLPVVVV ALSSVAGHWS GTILPAGYSL RWFERLGRPE FDALAASLEI GLGVAALGTA LGVALALALE GRTRRGVGAL VDALVMLPNG VPSVVLGLAV LIAYHAKPVD LSSSPAIVVF VQLALVLPFC YRCAAAALRP ELTVLREAAA SLGAPPAMVL RRVLLPQLVP AIRASLALGF ALSLGELGAT LTVYPPGFAT VPIVVIGAVE RGYYLPASAL SLLLLGASLV ALIAIAARAP RPPR
|
| |