Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0580 |
Symbol | aroE |
ID | 4888902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 546615 |
End bp | 547469 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640130520 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001061585 |
Protein GI | 126443542 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC GTTCGTTTCT GATCGGCCTG ATCGGCGCCG GGATCGGCGG CTCGCTGTCG CCCGCGATGC ACGAGGCGGA GGGGCGCGGG CAGGGTCTGA ACTACGTGTA CCGGCGCATC GATCTCGACG CGCTGGGGCT GACGGCCGAC GCGCTGCCCG AGCTGCTCGC GACCGCCGAG CGGATGGGCT TCGACGGGCT GAACATCACG CATCCGTGCA AGCAGCGCGT GATCGAGCAT CTCGACGAAT TGTCGGCGGA CGCGGCCGCG CTCGGCGCGG TCAACACGGT GTGCTTCGCG CACGGCCGGC GCATCGGCCA CAACACCGAT TGGTCGGGCT TCGCGAAGGC GTTCGCGCGC GGGCTGCCGG GCGCGTCGCT CGAGCGCGTC GTGCAGCTTG GCGCGGGCGG CGCGGGCGCG GCCGTCGCGC ACGCGGCGCT CACGATGGGC GCCGCGCAAC TCGCGCTCTT CGACGTCGAC CCCGTGCGCG CGCGCTCGCT CGCCGACCAG TTGCAGGCGC GCTTTCCGCA CGCGCGGCTG AGCGCCGGCG GCACGCTCGC CGATGCGCTC GCGAACGCGA CCGGCCTCAT TCACGCGACG CCGACGGGCA TGCTCGGGCA TCCGGGCCTG CCGCTGCCGG CGCACCTGCT GCGAAGCGGG CTCTGGGTGG CCGACATCGT CTATTTTCCG CTCGAGACCG AGCTGATCCG CGCGGCGCGC GCGCTCGGCT GCCGCACGCT GCCGGGCGGC GGCATGGCGG TCTATCAGGC GGTCGATGCG TTCGAGCTTT TCACGGGCCG CGCGCCGGAT GCCGAGCGAA TGTTCGAGCA CTTCCGGGCG CTCGTCGCGC GCTGA
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Protein sequence | MSERSFLIGL IGAGIGGSLS PAMHEAEGRG QGLNYVYRRI DLDALGLTAD ALPELLATAE RMGFDGLNIT HPCKQRVIEH LDELSADAAA LGAVNTVCFA HGRRIGHNTD WSGFAKAFAR GLPGASLERV VQLGAGGAGA AVAHAALTMG AAQLALFDVD PVRARSLADQ LQARFPHARL SAGGTLADAL ANATGLIHAT PTGMLGHPGL PLPAHLLRSG LWVADIVYFP LETELIRAAR ALGCRTLPGG GMAVYQAVDA FELFTGRAPD AERMFEHFRA LVAR
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