Gene BURPS668_A0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0562 
Symbol 
ID4888842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp527785 
End bp529329 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content74% 
IMG OID640130503 
Productmajor facilitator superfamily permease 
Protein accessionYP_001061568 
Protein GI126443791 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGC ACCTTCCCCA CCCCACCCTT TCCCGCGCCG CGCTCGTGCG GATCGTGTCG 
ACCGTCAGCG CGGGCTTCGT GATCACGCAG CTCGACGTGA CGATCGTCAA CGTCGCGCTC
GCGCGCATCG GCATCGATCT GCATACGAGC GTCGCGGGCC TGCAATGGAT CGTCGACGCC
TACACGCTCG CGCTCGCGGG CCTGATGCTG TCGGCCGGCG CGCTCGGCGA CCGGTTCGGC
GCGCGCCGGC TGTTCGCCGC CGGGCTCGCG CTCTTCGCCG TCGCATCGTT CGTCTGCGGC
ATCGCCGCGA ACGCGGCGAC GCTCATCGCC GCGCGCGCGC TGCAAGGGCT CGCGGCGGCC
GCGATGCTCC CGAACTCGCT CGCGCTGCTC AACCATGCGT GCGCGCACGA TCCACGGCTG
CGGGCGCGCG CGGTCGGCTG GTGGACCGCG TCGGGCGCGA TCTCGATCGC GGCGGGCCCG
GTGATCGGCG GCGTGCTGAT CGCGCAGTTC GGCTGGCGCA GCATCTTCTT CGTCAACCTG
CCGCTGTGCG CGGCGGGCCT CGCCGCGACG CGCCTGTGGA TCGACAGCGA CGACACGCGC
GCGGCGGCCG CTTCGTCGGC CTCGTCCGCT TCGTCCGCCT CGTCCGCTTC ATCCGCCGCC
GACGGCGCGC ACCATTCGCA CCCGGCGGCG GACCGGCGCG CATCCGGCCC GAATGCCTGC
GCCCCCGCGC CCAAGCGCGC CGCCGGCGCC GGAACACGCG GCCTCGACCT GCCCGGCCAG
TGCCTCGCCG TCGTCGCGCT CACGCTCTTC ACCGGCGCGG TGATCGACTG GCGTCCGGCG
CTCGTCGCGA TCGCGCTCGC GGCGGGCGCC GCGTTCGTGT TCGTCGAATC GCGCAGCGCG
CACCCGATGA TGCCGCTCGC GCTGTTCAGG CGGCGCACGT TCAGCGTCGC CGTGCTGTTC
GGTGTCTGCA TGAATCTGTC GTACTACGGG ATCATCTTCG TGCTGAGCCT GTATTTGCAG
CGCGTGCGCC ACGACACGCC GCTCGAGGCG GGGCTCGCGT TCCTGCCGCT CACGGGGGGC
TTCCTGCTGT CGAACGTCGC GAGCGGCTGG GCGACCGCGC ACTACGGCCC GCGCCGGCCG
ATGATCGCCG GCGCGCTGAT CGGCGCGACC GGTTTCGCGC TGCTGAGCGC GGTGCGTGCC
GATACGCCGA TCGCGATGCT CGTCGTGCCG TTCCTGCTGA TTCCGGGCGG CATGGGGCTC
GCGGTGCCCG CGATGACGAC GACGGTGCTC GCCTCGGTCG AACGCGCGCG CGCCGCGACC
GCGTCGGCCG TGCTCAATAC CGCGCGGCAA GCGGGCGGCG CGATCGGCGT CGCCGCGTTC
GGCGCGCTCG CGAGCGGCGC GCGGCCGCCG GACATCGTGT CGGGATTGCA CGCGTCGGCG
TACGTATCGG CCGCGCTCTT CGTGTTCGCC TCGGCGATGG CGGCCTTCGT GCACGGCGCG
CCGCAGCCGG CGGCGGGCAA GCCGGCGAAC GCGAACGCAC GCTGA
 
Protein sequence
MDTHLPHPTL SRAALVRIVS TVSAGFVITQ LDVTIVNVAL ARIGIDLHTS VAGLQWIVDA 
YTLALAGLML SAGALGDRFG ARRLFAAGLA LFAVASFVCG IAANAATLIA ARALQGLAAA
AMLPNSLALL NHACAHDPRL RARAVGWWTA SGAISIAAGP VIGGVLIAQF GWRSIFFVNL
PLCAAGLAAT RLWIDSDDTR AAAASSASSA SSASSASSAA DGAHHSHPAA DRRASGPNAC
APAPKRAAGA GTRGLDLPGQ CLAVVALTLF TGAVIDWRPA LVAIALAAGA AFVFVESRSA
HPMMPLALFR RRTFSVAVLF GVCMNLSYYG IIFVLSLYLQ RVRHDTPLEA GLAFLPLTGG
FLLSNVASGW ATAHYGPRRP MIAGALIGAT GFALLSAVRA DTPIAMLVVP FLLIPGGMGL
AVPAMTTTVL ASVERARAAT ASAVLNTARQ AGGAIGVAAF GALASGARPP DIVSGLHASA
YVSAALFVFA SAMAAFVHGA PQPAAGKPAN ANAR