| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0455 |
|---|
| Symbol | |
|---|
| ID | 4887394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 415376 |
|---|
| End bp | 416857 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640130396 |
|---|
| Product | ABC-type sugar transport system, ATPase component |
|---|
| Protein accession | YP_001061461 |
|---|
| Protein GI | 126443942 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCCTG TTCTGCTCGA AGCAAGCCAG GTGGCGAAGC GATTCAACGG CGTGAGCGCG
TTGCGCGACG GACGCCTGAG CCTTGCGGCC GGCCGCGTGC ATGCGCTGTG CGGCGGCAAC
GGCACCGGAA AATCCACGTT CCTGAACATC CTGATGGGGC TCCTGCGCCG CGACGAGGGC
ACGATCCGGC TGAACGGCCG CGATGTCGAT TTCGCGTCGC CCGCCGAAGC GCTCGCGAGC
CGCATGGCGA TCATCACGCA GGAGCTCTCG CCGGTGCCGG GGATGACGGT TGCCGAGAAC
CTGTATCTTG GCCGCGAGCC CACCCGCGCG GGCGTCGTCG TCGATTTCCG CGCGCTGAAG
CGCCGCGCAC AGGCGCTGCT CGACCGGCTC GGCTTCGCGA TCGACGCGGG CGCGCCGATG
CATCGGCTGA GCCTCGCGCA GACGCAGCTC GTCGAGATCG CGAAAGCGTT CAGCCACGAT
TGCCAGGTGA TGATCATGGA CGAGCCGACT TCCGCGATCG GCGAGCGCGA GACCGAGACG
CTGTTCGCCG CGATCCGCAA CGTCACCGCG CACGGCGCGG GCATCATCTA CGTGTCGCAC
CGGCTGAGCG AGCTGTTCGA CATCGCCGAC GACTACACGG TGTTTCGCGA CGGCGCGTAC
GTCGAGAGCG GCCGCCTCGC CGATATCGAC CGCGCGCATC TCGTGCGCGC GATCGTCGGC
CGCGAGATGC CCGTCGTCGA CAAGGCGCGC CGGCCCGCGC ACGGCGCGCC GTGCCTGAAG
GTGGAGGGCC TCACGCGCGC GAACGAGTTC GAGGACGTGA GCCTCGACGT GCGGCGCGGC
GAGATTCTCG GCATCTATGG GCTGATGGGC TCGGGCCGCA GCGAATTCCT CAATTGCGTG
TATGGCTTGA CGCGCCCCGA CGCGGGCGCC GCCACTCTCG GCGGCAAGCC GCTGCCGCGC
GGCGAGCCCG CGCGGTCGAT CCGCGCGGGC ATCGCGCTCG TCACCGAGGA CCGCAAGGAT
TCGGGCCTCG TGCTCTGCGG CAGCGTGCAG GAGAACATCG CGATGGCCGC GTACCGCCGC
CTGTCGCGCG GCGGCGTGAT CCGGCGCTCG CTCGTGCGGC GGCTCGCGCA GGCGATGGTC
GAGCGGCTGC GGATCAAGGC CGCTTCGCTG CGCATGCCGG TATCGGCGAT GAGCGGCGGC
AACCAGCAGA AGGTCGTGCT CGCGAAATGC CTGTCGACCG AGCCCGTGCT GCTGCTGTGC
GACGAGCCGA CGCGCGGCAT CGACGAAGGC GCGAAACAGG AGATCTACCG GCTGCTCGAT
GCGTTCGCGC GCGACGGCGG CGCGGTGATC GTCGTGTCGT CGGAGGCGCC CGAGCTGCTG
TATCTGAGCG ACCGGATCGC CGTGTTCAAG GGCGGCCGCG TCGCCGCCGT CCGCCCGGGC
GACGGCGCCA CCCAGGAATC CCTGCTCCAT CTCGCTTCAT GA
|
|---|
| Protein sequence | MTPVLLEASQ VAKRFNGVSA LRDGRLSLAA GRVHALCGGN GTGKSTFLNI LMGLLRRDEG
TIRLNGRDVD FASPAEALAS RMAIITQELS PVPGMTVAEN LYLGREPTRA GVVVDFRALK
RRAQALLDRL GFAIDAGAPM HRLSLAQTQL VEIAKAFSHD CQVMIMDEPT SAIGERETET
LFAAIRNVTA HGAGIIYVSH RLSELFDIAD DYTVFRDGAY VESGRLADID RAHLVRAIVG
REMPVVDKAR RPAHGAPCLK VEGLTRANEF EDVSLDVRRG EILGIYGLMG SGRSEFLNCV
YGLTRPDAGA ATLGGKPLPR GEPARSIRAG IALVTEDRKD SGLVLCGSVQ ENIAMAAYRR
LSRGGVIRRS LVRRLAQAMV ERLRIKAASL RMPVSAMSGG NQQKVVLAKC LSTEPVLLLC
DEPTRGIDEG AKQEIYRLLD AFARDGGAVI VVSSEAPELL YLSDRIAVFK GGRVAAVRPG
DGATQESLLH LAS
|
|---|
| |