Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0452 |
Symbol | opcP |
ID | 4887700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 412677 |
End bp | 413555 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640130393 |
Product | porin |
Protein accession | YP_001061458 |
Protein GI | 126442679 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGGCC GGCAGGCGTG GATGGGGCTG TCGAGCGAAC GCTACGGGAC GCTCACGATG GGGCGCCAGT ACGATCCGAT CGTCGACTTC GTCGGCACGA TCGGCGCGGG CGCGTTCCTG ACCGGCATGG GCGCGCATCC GGGCGATCTC GACAACATCG ACAATCAGGC GCGCGAGAAC AACTCGATCA AGTACGTGAG CCCGAAGTTC GGCGGCCTCG CGCTCGGCGC GCTGTACGGC TTCGGCAATC AGGCGGGCAG CGTGAAGAAC CAGAACACGT GGAGCGTGGG CGGCCAGTAT GTGAACGGGC CGTTCTCGCT CGGCGCCGCG TACCTGTATG CGACGAACGC GTACGGCGCG AACGGCGGCG CGTGGACGGG TTCGTACGAC GGCACGTTCG CTTCGTCGAT CAACGAAGGC TTCGCATCGG CGAAGAGCAT GCAGATCGTC GCGGCGGCGA GCACCTATCA GATCGGCGCG GTGACGCTCG GCCTGTCTTA CAGCAACACG CGGTACAAAT CCGGCGCGTT CTCGACGTTC AACGGCACCG CGACGTACAA CTCGATCGGC GGCACCGTAT CGTGGCAGGC GACGCCCGAG CTGCGCGTCG CGGCGGGCTA TGATTTCACG CGTGGCAGCT CGATCGACGG TCAGTCCGCG CCGAAATACC ATCAGGTGAA CTTCGCGTCG TACTACTACC TGTCCAAGCG CACCGCGCTG TATGGCCTCG TCGGTTATCA GAAGGCGAGC GGCAAGACGC TCGATGCGTA CGGCAACGTC GTCGCGGCGA CGGCGTCGGT CGGCGACGTC GGCAACGGCA TTTCGTCGGC GGGCGATACG CAGACGCTCG TGCGCATCGG CGTGCGTCAC ACGTTCTGA
|
Protein sequence | MFGRQAWMGL SSERYGTLTM GRQYDPIVDF VGTIGAGAFL TGMGAHPGDL DNIDNQAREN NSIKYVSPKF GGLALGALYG FGNQAGSVKN QNTWSVGGQY VNGPFSLGAA YLYATNAYGA NGGAWTGSYD GTFASSINEG FASAKSMQIV AAASTYQIGA VTLGLSYSNT RYKSGAFSTF NGTATYNSIG GTVSWQATPE LRVAAGYDFT RGSSIDGQSA PKYHQVNFAS YYYLSKRTAL YGLVGYQKAS GKTLDAYGNV VAATASVGDV GNGISSAGDT QTLVRIGVRH TF
|
| |