Gene BURPS668_A0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0446 
Symbol 
ID4887379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp407913 
End bp408761 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID640130387 
ProductABC transporter, permease protein 
Protein accessionYP_001061452 
Protein GI126442885 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAT CCACCACCGC CGGGTTTGCC GGCGGTATTC CGTTTCGTCG CGGCAAGCGG 
CGCCCGTCGT TCGGCGCCAT CGTCGTCAAC GGCGTCGTCG CGCTGTTCGC GCTGTATCTA
CTGATGCCGA TCGTGCTGCT GCTGATCGGA TCGATCGGGC AGAGTTGGAC GAACACGCTG
CTGCCCGCCG GCTTCACGTG GCGCTGGTTC GCCGAACTGG CCGCCGATCC GAGCTTGCGC
CGCGCGTTCA GCGTGAGCTT CGTCGTCGCG CTCGCGTGCT GCGCGCTCGA CACGTTGGCC
GGCGTGCCGC TCGCGTATGC GCTGCATCAT CGCGCGCTTC GCGGCTGCGG CGTTGCCGCG
CGCGTCGTGA TGCTGACGCC GATCGGCGTG CCGGCGCTCA CGCTCGGCTT CGGCTACATC
GTGGTATTCG GCGGCGACGC GTTGCCGTGG CTCGGCACGC TGCCGCTGAT GATCGCCGCG
CATGCGGTGC TGACGCTGCC GTATCTGCTG CAGACGTTGT TGAGCGATCT GCGCCACCTC
GATCTCGCGA AGCTCGAGGC CTGTGCGGCA ACGCTCGGCG CGCCGCCGCT GCGGCAGTTT
TTCACGATCG TGCTGCCAAA CCTGCGGCAG AGCCTTTTTT CCGGGCTCGT GATGGTCGCG
GCGCTATCGA TCGGCGAGTT CCAGGTATCG AACCTGATCG CCGGCTTTCG CTACCGCAAT
TTCCCCGTCG TGCTGCTGCA GGCGTTCTAC GGCGCGTCCG GCATCGCCTG CGCGGCGAGT
GTCGTGCTGC TGCTGCTCGC CGTACTCGCG ACGCTCGCGT CGACCCACAC CGTGCAACGA
CTGAAGTGA
 
Protein sequence
MRSSTTAGFA GGIPFRRGKR RPSFGAIVVN GVVALFALYL LMPIVLLLIG SIGQSWTNTL 
LPAGFTWRWF AELAADPSLR RAFSVSFVVA LACCALDTLA GVPLAYALHH RALRGCGVAA
RVVMLTPIGV PALTLGFGYI VVFGGDALPW LGTLPLMIAA HAVLTLPYLL QTLLSDLRHL
DLAKLEACAA TLGAPPLRQF FTIVLPNLRQ SLFSGLVMVA ALSIGEFQVS NLIAGFRYRN
FPVVLLQAFY GASGIACAAS VVLLLLAVLA TLASTHTVQR LK