Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0384 |
Symbol | acnD |
ID | 4885871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 349279 |
End bp | 351873 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640130325 |
Product | aconitate hydratase |
Protein accession | YP_001061390 |
Protein GI | 126444409 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 [TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.419357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTG CCAACCGCAA ACCCCTGCCC GGCACGTCGC TCGACTACTT CGACGCGCGC GCCGCCGTCG ACGCGATCCG CCCGGGCGCG TACGACGCGT TGCCGTACAC GTCGCGCGTG CTCGCCGAGA ACCTCGTGCG CCGCTGCGAT CCGGCGATCC TCGCCGATTC GCTGACGCAG CTCGTCGAGC GCAAGCGCGA GCGCGATTTC CCGTGGTTCC CGGCGCGCGT CGTCTGCCAC GACATCCTCG GCCAGACCGC GCTCGTCGAT CTCGCGGGCC TGCGCGACGC GATCGCCGAA CGCGGCGGCG ATCCGGCGAA GGTGAATCCG GTCGTGCCGG TGCAACTGAT CGTCGATCAT TCGCTCGCCG TCGAATGCGG CGGCTTCGAT CCCGACGCGT TCGCGAAGAA CCGCGCGATC GAGGATCGCC GCAACGAGGA TCGCTTCCAC TTCATCGAAT GGACGAAGAA GGCGTTCGAG AACGTCGACG TGATTCCGCC CGGCAACGGC ATCATGCACC AGATCAATCT GGAGAAGATG TCGCCCGTGA TCCAGGCGCA GGACGGCGTC GCGTACCCGG ACACCTGCGT CGGCACCGAC AGCCACACGC CGCACGTCGA CGCGCTCGGC GTGATCGCGA TCGGCGTGGG CGGGCTGGAG GCGGAGAACG TGATGCTCGG CCGCGCATCG TGGATGCGGC TGCCCGACAT CGTCGGCGTC GAGCTGACCG GCAAGCGCCA GCCCGGCATC ACCGCGACCG ACGTCGTGCT CGCGCTGACC GAATTCCTGC GCCGCGAGAA AGTGGTCGGC GCGTATCTGG AATTCCGCGG CGAGGGCGCG AAGAGCCTCA CGCTCGGCGA TCGCGCGACG ATCTCGAACA TGGCGCCCGA GTACGGCGCG ACCGCCGCGA TGTTCTTCAT CGACGAGCAG ACGATCGATT ACCTGCGCTT GACGGGCCGC AGCGACGAGC AGGTGAAGCT CGTCGAAACC TACGCGAAGG CGGCGGGCCT GTGGGCCGAC AGCCTCGCGC ACGCGCAGTA CGAGCGCACG CTGACGTTCG ACCTGTCGAG CGTCGTGCGC AACATGGCCG GCCCGTCGAA TCCGCACAAG CGGCTGCCGA CGTCCGATCT CGCCGCGCGC GGGATCGCCG GCAAATGGGA GGAGAAACCG GGCGAGATGC CCGACGGCGC GGTGATCATC GCCGCGATCA CGAGCTGCAC GAACACGAGC AACCCGCGCA ACGTGATCGC CGCGGCGCTG CTCGCGCGCA ACGCGAACGC ACGCGGCCTC GCGCGCAAGC CGTGGGTGAA GAGCTCGCTC GCGCCCGGCT CGAAGGCGGT CGAGCTGTAC CTGAAGGCGG CGAACCTGCT GCCCGAGCTG GAGAAGCTCG GCTTCGGCAT CGTCGCGTTC GCGTGCACGA CCTGCAACGG GATGTCCGGC GCGCTCGACC CGAAGATCCA GCAGGAGATC GTCGATCGCG ACCTGTACGC GACGGCCGTG CTGTCCGGCA ACCGCAACTT CGACGGGCGC ATCCATCCGT ATGCGAAGCA GGCGTTCCTC GCGTCGCCGC CGCTCGTCGT CGCATACGCG ATCGCGGGCA CGATCCGCTT CGACATCGAG AAGGACGCGC TCGGCCACGA CAAGGACGGC AAGCCCGTCA CGCTGAAGGA CATCTGGCCG ACCGACGAGG AGATCGACGC GATCGTCGCG TCGAGCGTGA AGCCCGAGCA GTTCCGCACC GTCTACGAGC CGATGTTCGC GCGCGCGGCC GACGCCGGCG AGCGCGCGGC GCCGCTGTAC GACTGGCGGC CGCGGAGCAC GTACATTCGC CGCCCGCCGT ACTGGGAAGG CGCGCTCGCG GGCGAGCGCA CGCTCAAGGG CATGCGCGCG CTCGCCGTGC TCGGCGACAA CATCACGACC GATCACCTGT CGCCGTCGAA CGCGATCCTG CCGACGAGCG CGGCGGGCGA ATACCTCGCG AAGATGGGCC TGCCCGAAGA GGACTTCAAC TCGTACGCGA CGCACCGCGG CGATCACCTG ACCGCGCAGC GCGCGACGTT CGCGAACCCG ACGCTCGTCA ACGAGATGGC GATCGTCGAC GGCGAGGTGA AGAAGGGCTC GCTCGCGCGC GTCGAGCCGG ACGGCAAGGT GATGCGCATG TGGGAGGCGA TCGAGACCTA CATGTCCCGC AAGCAGCCGC TCGTCGTGAT CGCCGGCGCC GATTACGGCC AGGGCTCGTC GCGCGACTGG GCGGCCAAGG GCGTGCGGCT CGCGGGCGTC GAGGCGATCG TCGCGGAAGG CTTCGAGCGG ATTCACCGCA CGAACCTGAT CGGCATGGGC GTGCTGCCGC TCGAGTTCAA GCCCGGCACG AACCGCGCGA CGCTCGCGAT CGACGGCACC GAGACGTTCG ACGTGATCGG CGAGCGCACG CCGCGGGCCG ATCTCACGCT CGTGATTCAC CGCAGCAGCG GCGAGCGCGT GGCGGTGCCC GTCACGTGCC GGCTCGATAC GGCCGAGGAA GTGTCGATCT ACGACGCGGG CGGCGTGCTG CAGCGCTTCG CGCAGGACTT CCTCGAATCG TCGAGGGCGG CGTGA
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Protein sequence | MNTANRKPLP GTSLDYFDAR AAVDAIRPGA YDALPYTSRV LAENLVRRCD PAILADSLTQ LVERKRERDF PWFPARVVCH DILGQTALVD LAGLRDAIAE RGGDPAKVNP VVPVQLIVDH SLAVECGGFD PDAFAKNRAI EDRRNEDRFH FIEWTKKAFE NVDVIPPGNG IMHQINLEKM SPVIQAQDGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV ELTGKRQPGI TATDVVLALT EFLRREKVVG AYLEFRGEGA KSLTLGDRAT ISNMAPEYGA TAAMFFIDEQ TIDYLRLTGR SDEQVKLVET YAKAAGLWAD SLAHAQYERT LTFDLSSVVR NMAGPSNPHK RLPTSDLAAR GIAGKWEEKP GEMPDGAVII AAITSCTNTS NPRNVIAAAL LARNANARGL ARKPWVKSSL APGSKAVELY LKAANLLPEL EKLGFGIVAF ACTTCNGMSG ALDPKIQQEI VDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE KDALGHDKDG KPVTLKDIWP TDEEIDAIVA SSVKPEQFRT VYEPMFARAA DAGERAAPLY DWRPRSTYIR RPPYWEGALA GERTLKGMRA LAVLGDNITT DHLSPSNAIL PTSAAGEYLA KMGLPEEDFN SYATHRGDHL TAQRATFANP TLVNEMAIVD GEVKKGSLAR VEPDGKVMRM WEAIETYMSR KQPLVVIAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLIGMG VLPLEFKPGT NRATLAIDGT ETFDVIGERT PRADLTLVIH RSSGERVAVP VTCRLDTAEE VSIYDAGGVL QRFAQDFLES SRAA
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