| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0333 |
|---|
| Symbol | |
|---|
| ID | 4886148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 298143 |
|---|
| End bp | 299642 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640130274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001061339 |
|---|
| Protein GI | 126445449 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC AGCAAGTCCA GACGGCCGCC GCCGGCGTCC AGCCGCAAGC AGATTCGGAT
TTCGCGCAGT TGCTCGCGCA GGAGTTCAAG CCGAAGACGG AGCAGGCGCG CGAAGCGGTC
GAATACGCGG TGCGCACGCT CGCCGAGCAG GCGCTCGCGC AATCGGCGAC GATCAGCGAC
GATGCATACA AGAGCATCGC CGCGATCATC GCGCAGATCG ACCATAAGCT ATCCGAACAG
ATCAACCTGA TCCTCCATCA CGCGGATTTC CAGAAGCTCG AATCGGCGTG GCGCGGACTG
CATCACCTGG TGTCGAACAC CGAGACCGAC GAGCGCCTGA AGATCCGCTT CATGGACATC
TCGAAGGAAG AGCTGCGCCG CACGATGCGG CGCTACAAGG GGCAATCGTG GGACCAGAGC
CCGCTCTTCA AGCAGATCTA CGAGGAGGAG TACGGGCAGC TCGGCGGCGA GCCGTACGGC
TGCCTCGTCG CCGATTACTA CTTCGACCAC ACGCCGCCCG ACGTCGACCT GCTCGGCTCG
ATCTCGAAGG TGGCCGCGTC CGCGCACACG CCGTTCATCT CCGGCGCCTC GCCTTCGGTG
CTGCAGATGG AATCGTGGCA GGAGCTCGCG AACCCGCGCG ACCTGACGAA GATCTTCACG
CAAAACCTTG AATACGCGTC ATGGAACGCG CTGCGCAATA TGGACGACGC GCGCTACATC
GGCCTCGCGA TGCCGCGCTT CCTGTCGCGC CTGCCGTACG GCGTGCTGAC GAATCCCGTC
GACGAGTTCG ACTTCGAGGA AGACACGAAC GGTGCCGACC ATCGCCGCTA CGCGTGGACG
AACGCCGCCT ACGCGATGGG CGTGAACATC AACCGGTCGT TCCGGCTCTA CGGCTGGTGC
TCGCTCATTC GCGGCGTCGA ATCGGGCGGC ACGGTCGAGA ACCTGCCGTG CCATACGTTC
CCGACCGACG ACGGCGGCAT CGACATCAAA TGCCCAACCG AGATCGCGAT CTCGGACCGG
CGCGAGGCGG AGCTGTCGAA GAACGGCTTC ATTCCGCTCG TGCACCGCAA GAACACCGAT
CACGCGACGT TCATCGGCGC GCAATCGCTG CACAAGCCGG CCGAATACGA CGATTCCGAC
GCGACGGCCA ACGCGAACCT GTCGGCGCGC CTGCCGTATC TGTTCGCATG CTCGCGCTTC
GCGCACTACC TGAAGTGCAT CGTGCGCGAC AAGGTGGGCG CCTTCAAGGA GCGCGAGGAC
ATGCAGCGCT GGCTGAACGA ATGGATCATG AACTACGTCG ACGCGGACCC GGCGAACTCG
TCGCAGGACA CGAAGGCGCG CCGGCCGCTC GCGGCCGCCG AGGTGGTCGT CGAGCAGGCG
CAGGGCAACC CCGGCTACTA CCAGGCGAAG TTCTTCCTGC GGCCGCATTT CCAGCTCGAG
GGCCTGACCG TGTCGCTGCG GCTCGTCGCG AAGCTGCCGT CGATCAAGGA AGCCGCCTGA
|
|---|
| Protein sequence | MKKQQVQTAA AGVQPQADSD FAQLLAQEFK PKTEQAREAV EYAVRTLAEQ ALAQSATISD
DAYKSIAAII AQIDHKLSEQ INLILHHADF QKLESAWRGL HHLVSNTETD ERLKIRFMDI
SKEELRRTMR RYKGQSWDQS PLFKQIYEEE YGQLGGEPYG CLVADYYFDH TPPDVDLLGS
ISKVAASAHT PFISGASPSV LQMESWQELA NPRDLTKIFT QNLEYASWNA LRNMDDARYI
GLAMPRFLSR LPYGVLTNPV DEFDFEEDTN GADHRRYAWT NAAYAMGVNI NRSFRLYGWC
SLIRGVESGG TVENLPCHTF PTDDGGIDIK CPTEIAISDR REAELSKNGF IPLVHRKNTD
HATFIGAQSL HKPAEYDDSD ATANANLSAR LPYLFACSRF AHYLKCIVRD KVGAFKERED
MQRWLNEWIM NYVDADPANS SQDTKARRPL AAAEVVVEQA QGNPGYYQAK FFLRPHFQLE
GLTVSLRLVA KLPSIKEAA
|
|---|
| |