Gene BURPS668_A0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0331 
SymbolsciM 
ID4888310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp297541 
End bp298026 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID640130273 
ProductSciM protein 
Protein accessionYP_001061338 
Protein GI126444160 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG ATATTTTTCT GAAGATCGAC GGCATCAACG GTGAATCCCT CGACGACAGC 
CACAAGGACG AGATCGAAGT CCTGAACTGG AACTGGGAGA TTCAGCAGGA ATCGACGATG
CACACGGGCA GCGGCGGCGG CGCCGGCAAG GCGAGCGTGA AGGATCTGAC GTTCGAGCAC
GCGATCGACC GCGCGAGCCC CAACCTGATG AAGTACGCGC TGACCGGCAA GCACGTCGAT
CAGGCGGTGC TCGTGATGCG CAAGGCGGGC GGCAATCCGC TCGAATACCT GAAGCTCACG
ATGAGCGACG TGATCATCAC GCGCGTGCGG CCGTCGGGCA GCCGCGACGA CACCGAGCGC
AGCCGCGAGA CGGTATCGCT GTCGTTCGCG AAGGTGAAGC AGGAGTATGT CGTGCAGAAC
GCGCAGGGCG GCAGCGGCGG CGCCGTCACG ACGAGCTTCG ACATCAAGGG CAACAAGGAA
GCCTGA
 
Protein sequence
MAQDIFLKID GINGESLDDS HKDEIEVLNW NWEIQQESTM HTGSGGGAGK ASVKDLTFEH 
AIDRASPNLM KYALTGKHVD QAVLVMRKAG GNPLEYLKLT MSDVIITRVR PSGSRDDTER
SRETVSLSFA KVKQEYVVQN AQGGSGGAVT TSFDIKGNKE A