Gene BURPS668_A0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0293 
Symbol 
ID4887661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand- 
Start bp260330 
End bp260959 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID640130234 
Productouter membrane porin OpcP 
Protein accessionYP_001061299 
Protein GI126443052 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.484848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCG GCTTCGCGAA CGATCGCCTC TACGGCGCGG CGCTGCAATA CCAGCGCGGC 
GGCCTGACGG TCGGCGCGTC GTACCCGACG ATGAACCGCG CGCGCAGCGC GGATGCCGCG 
GGCGCCGTCA CGGGCGACAA CACGTTCGAC GCATCGTCGC AGCAGAACCT CGGCATCGGC 
GCGACCTACG CATTCTCGAA GGCGCTGATC GGCTTCGCGT ATTCGCACGT CGACGTCTAC 
GATCCCACCT CGAACGCATA CTTCACCGGT ACGACGCGGC CCGCGGGCGG GCACTGGCAA 
TCGTGGAAGT TCGACCACTT CGAGATCAAC GGCCGCTATC GCGTGACACC CGCGTTCTAC 
GCCGGCGCCG CGTACACGTA TACGCAGGCG CGCGTCGATT CGACGGCCGA CGCATTCCAT 
CCGAAGTGGC GCCCACTGAG CACGAAGCTC GACTACGATC TGTCGAAGCG CTCGTCGGGG 
TTCGCCGAAG GCGTCTACCA GCACGCGCAG CACGCGATGA ACGCGCGCAC GGGCACCGGT 
TTCGACCATG CGTACATCCC GGGCGCGGCG AATATCGCGT CGGGACCGAA CCAGTACGTC 
GTGCGGCTCG CACTGCTGCA CCCGTTCTGA
 
Protein sequence
MAGGFANDRL YGAALQYQRG GLTVGASYPT MNRARSADAA GAVTGDNTFD ASSQQNLGIG 
ATYAFSKALI GFAYSHVDVY DPTSNAYFTG TTRPAGGHWQ SWKFDHFEIN GRYRVTPAFY 
AGAAYTYTQA RVDSTADAFH PKWRPLSTKL DYDLSKRSSG FAEGVYQHAQ HAMNARTGTG 
FDHAYIPGAA NIASGPNQYV VRLALLHPF