Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0196 |
Symbol | |
ID | 4888234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 180355 |
End bp | 180963 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640130137 |
Product | HAD family hydrolase |
Protein accession | YP_001061202 |
Protein GI | 126442963 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.902954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA CGCTGATTTG CTTCGATCTG GACGGGACGC TGAGCAAGCA GGAGATTCTT CCGAGAATCG CCGAACTGGC CGACATATCA GAGGAAATTG CGGCGCTCAC GCAGGCGACG ATTCAAGGCG TGATTCCGTT CGAGATGTCG TTCAAGCTGC GCGTACGGCT ATTGCGCGAC ATATGCCCGA GAAAGATCAG TGATTACGTG GCCGAGACGG TCGAGTTGGA CGAGCGCATT CTGCGGTACA TCCGGAATGG AAGCGGGGCG GATTGCGTGG TCGTGACGGG AAATCTCGAC TGCTGGATCG AGGGGCTCGT GCGACGCATC GGCGTGCCGT ACGTCAGCTC CCTGGGCGAA GTGAAGAATG GGCGGCTTCT GGGCGTCGCG AACGTATTGC GCAAGGATGC GCCCGTTGCG CAATTCCGGC GTGACTATCG GCGGATCATC GCGGTCGGAG ACGGCGAGAA CGACATTCCG CTGTTCAGAC AGGCGGACGT GGGTATCGCA TATGGCGGCG TGCACGCGCC ATCGGCCAAT CTCGCGAACA TGGCCGACTA CATCGTATAT TCGAGCGAGG CGCTATGCGA CCTGTTGAGC ATGCAGTAA
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Protein sequence | MSDTLICFDL DGTLSKQEIL PRIAELADIS EEIAALTQAT IQGVIPFEMS FKLRVRLLRD ICPRKISDYV AETVELDERI LRYIRNGSGA DCVVVTGNLD CWIEGLVRRI GVPYVSSLGE VKNGRLLGVA NVLRKDAPVA QFRRDYRRII AVGDGENDIP LFRQADVGIA YGGVHAPSAN LANMADYIVY SSEALCDLLS MQ
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