Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0178 |
Symbol | clpB |
ID | 4885784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 164196 |
End bp | 166883 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640130119 |
Product | chaperone clpB |
Protein accession | YP_001061184 |
Protein GI | 126443108 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGTGCAA ACGTCGCATA TTCACGAATT CACGATCGAG ACATGACAGT TTCAAGACAG GCACTATTCG GCAAGCTCGG CTACTCGCTG TTTCGCAGCA TCGAATCGGC GACGGCGTTC TGCAAGCTTC GCGGCAACCC TTACGTCGAG CTGGTGCATT GGCTGCATCA GATGCTTCAG GCCGCTGACG GCGATATGCA GCGGATCGCT CGCCACTGCG ACATCGACCT CGGCGAGCTG GAGCGCGACA TGGTGCGCGC GCTCGGCGAA CTGCCGGCGG GCGCGAGCTC GATCAGCGAT TTCTCGCACC ACATCGAGAC GGCGATCGAG CGCGCGTGGG TGCTGGCGAC ACTGGACTTC GGCGATCGCC GGATTCGCGG CGCGTGGCTA CTGGCTGCGT TGCTGAAGAC GCCGGAACTC AGGCGCGTAC TGCTGTCGAT TTCGTCCGCG TTCGGCCGGA TTCGTGTCGA CGAACTGGAT GCGATGTTGC CGGCCTGGAT CGACGGCTCG CCCGAGGCGA ACGAGACGCC GTACGACAAC AGCGACTTCG GCGCGGCCAT ACCGGGCGAG GCGTCGAGCG CGATGCAGCA AAAGGGCGGC GGTTCACCGC TGGAGCAGTT CTGCCTCGAT CTCACCGCGC GAGCGCGAGC GGGGCAGATC GATCCGGTCG TCGGTCGTGA GCTGGAAATC CGCACGATGA TCGACGTCCT GTTGCGCCGC CGCCAGAACA ACCCGCTGCT GACGGGCGAG GCGGGCGTGG GCAAGACGGC CGTCGTCGAA GGGCTCGCGC GCGCGATCGC CGCCGGCGAT GTGCCGCCGA AGCTTGCCGA TGCGCGCCTG CTGAGCCTCG ATGTCGGCGC GCTGTTGGCC GGGGCGAGCA TGAAGGGCGA ATTCGAGGCG CGCCTGAAAG GCGTGCTGGA GGCGGCGGCG AAAGCGACGC TGCCCGTCAT TCTGTTTGTC GACGAGATTC ACACGCTGAT CGGCGCGGGC GGCCAGGCGG GCACCGGAGA TGCCGCGAAC CTGCTCAAGC CCGCGCTCGC GCGCGGCACG CTGCGAACGA TCGGTGCGAC GACGTGGGCG GAATACAAGC GGCACATCGA AAAGGATCCG GCGCTCACAC GCCGCTTCCA GGTGTTGCAG GTTCCCGAGC CCGACGAGGC GGCCGCGATC GACATGGTTC GAGGGCTGAC GCGAACCTTC TCGCGTCATC ATGGCGTCGT CGTGCTGGAC GAGGCGATTC GCGCGGCGGT CAAGCTGTCG CATCGCTACA TTCCATCCCG TCAGTTGCCG GACAAGGCGA TCAGCCTGCT CGATACGGCG TGCGCGCGCG TCGCGTTGTC GCAGCATGCG CCGCCGCGTG AGCTGCAGGA CGTCCGCAGA AGATTGGAGG CTGCGAGGGT GCGGCTCGAA TTGCTCGACG GCGAGCAGCG CATCGGCCTT GGCGACGAAG CCGCGCTCGC GCAGTCTCGC GCGGAAATCG CCGCGCTCGA GGTGGAGGAG CAATCGATCG ACGCTTGCTG GCGGCAGCAG ATCGAGGCCG CGCAGACGCT GCTCAGCGCG CGCGAGGCGG CGGGCGACGC TGCGGCGAGC GCGATCGACG CGCTGCGCGA GCTGGAGCAT GCGCTGTCGA ACCTGCAAGG CGATCACGCG TTCGTTTTCC CCGAGGTCAA CGAAGCGATC GTCGCGGATA TCATGTCCGA CTGGACCGGC ATTCCGGTCG GCAGGATGGT GACGGACGAA GTGTCCGCCG TGCGCGCCTT GCCGGACACG CTCGCCGCCC GCGTGATCGG TCAACGCGAT GCGTTGCATC AGATTGGCGA TCGGGTGCAA ACGGCGCGCG CCGGATTGAC CGATCCGAAG AAGCCGCTCG GCGTGTTCCT GCTCGCGGGG CCGTCGGGCG TCGGCAAGAC GGAGACGGCA TTGGCGCTTG CCGAGGCGCT GTACGGCGGC GAGCAGAATC TCATCACGAT CAACATGAGC GAATATCAGG AGGCGCATAC GGTATCGGGG CTGAAGGGCG CCCCGCCGGG TTACGTCGGA TACGGCGAGG GCGGCGTGCT GACCGAGGCG GTGCGCAGGC GTCCGTATTC CGTCGTGCTT CTCGACGAGA TCGAGAAGGC GCATCCCGAC GTCCACGAGA TGTTCTTCCA GGTATTCGAC AAGGGCTACA TGGAGGACGG CGACGGGCGC TATATCGATT TTCGCAACAC GACGATTCTT CTCACCAGCA ATGCAGGCTC CGACCTCGTG TCCGGACTGT GCATGGACGA GGCTTGCGCT CCCGACGCGG ACGGCCTTTG CGCCGCGCTC GCTTCCGAAT TGCTCAAGAC GTTTCCCGCG GCGTTTCTCG GGCGCGTGAC GCTGGTGCCC TATCGTCCGC TCGCGCAGGA AACGCTATCG CGCATCGTCC GGCTGCATCT GGACCGAGTG GTGACGCGAA TGGCCGAGAA TCAGGGTGTC GCCCTGCGTT ATTCGGACAA TGTCGTCGAT TACGTCGTCA ATCGCTGCCT CGTGCAGGAA ACGGGGGTGC GCTTGCTGAT CGGCTTCATC GAGCAGCACG TGTTGCCGCT GCTCGCGAAG CTCTGGCTGG ATTCGCTTGC GTCCAAGCAC GTGCTGACAC GCGTCGACCT CGACGTGGCC GATCCCGCCG CGGCCCCGGC CGAAGCGTTC GCGCTGCGCG CTTCATGA
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Protein sequence | MCANVAYSRI HDRDMTVSRQ ALFGKLGYSL FRSIESATAF CKLRGNPYVE LVHWLHQMLQ AADGDMQRIA RHCDIDLGEL ERDMVRALGE LPAGASSISD FSHHIETAIE RAWVLATLDF GDRRIRGAWL LAALLKTPEL RRVLLSISSA FGRIRVDELD AMLPAWIDGS PEANETPYDN SDFGAAIPGE ASSAMQQKGG GSPLEQFCLD LTARARAGQI DPVVGRELEI RTMIDVLLRR RQNNPLLTGE AGVGKTAVVE GLARAIAAGD VPPKLADARL LSLDVGALLA GASMKGEFEA RLKGVLEAAA KATLPVILFV DEIHTLIGAG GQAGTGDAAN LLKPALARGT LRTIGATTWA EYKRHIEKDP ALTRRFQVLQ VPEPDEAAAI DMVRGLTRTF SRHHGVVVLD EAIRAAVKLS HRYIPSRQLP DKAISLLDTA CARVALSQHA PPRELQDVRR RLEAARVRLE LLDGEQRIGL GDEAALAQSR AEIAALEVEE QSIDACWRQQ IEAAQTLLSA REAAGDAAAS AIDALRELEH ALSNLQGDHA FVFPEVNEAI VADIMSDWTG IPVGRMVTDE VSAVRALPDT LAARVIGQRD ALHQIGDRVQ TARAGLTDPK KPLGVFLLAG PSGVGKTETA LALAEALYGG EQNLITINMS EYQEAHTVSG LKGAPPGYVG YGEGGVLTEA VRRRPYSVVL LDEIEKAHPD VHEMFFQVFD KGYMEDGDGR YIDFRNTTIL LTSNAGSDLV SGLCMDEACA PDADGLCAAL ASELLKTFPA AFLGRVTLVP YRPLAQETLS RIVRLHLDRV VTRMAENQGV ALRYSDNVVD YVVNRCLVQE TGVRLLIGFI EQHVLPLLAK LWLDSLASKH VLTRVDLDVA DPAAAPAEAF ALRAS
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