Gene BURPS668_A0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0155 
Symbol 
ID4886242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp135503 
End bp137179 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content63% 
IMG OID640130096 
ProductOmpA family protein 
Protein accessionYP_001061161 
Protein GI126444048 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGTC AGATTCGATT TTGGCTCGTA TGGGGCGCCA TACCCTTCGT GGTGCTCGCG 
AGCCTTTGCC TGCCGTTGCG CATGCAGCCG GATTGGTCTC ATGTGCTGAC CATCGTTTTG
ATCATTGCCG CCATCGTGCT GGCGATCGAA ATATTCGAAC ACTCTCGCGA GACAGCGCAA
GACCGAACGG CCGAAGCCGA AATCGACGAT CACGAGCTGG CGGTGATCAT CGTCGCGGGC
CCTCACGCAT CGTCGCTTTT CAATAGCAGC GGGGACGATA CGGCGTTTCG GCGCGAAGCC
GGCGCGTTAT GGCTGCGCGC CGACAGCGTC GAGCAATTGC GAGACACGAT GATGCGCGTC
AAGGCGTCGC GCGGACGGTT CCCGGACGCC GCCGTGGTGC CGCTCGTATC GGAAAGCGAT
GACGAAAGCG ACATGAGGCA GGCGTTCGCG AAGTGGCGAA CCGAACTCCG CGAAGCGCTT
TGCTATCCCG ATGCGGCCTA TGTCCTGCCT TGCTATCTCG CCGTCTACAC GTGTCTTGGA
TTCAAGGGAG CCGACGGCGC GCGTCCGAAG TGGACGGGCG ATGCAATAGA AATCGGCACG
AGGCAGATGA ATGCCGCATC GAAAGTGGGC GAGCTGCTCG CATCGATTCG ACAACAACTG
CTTCGGCCGT CGCCCACCGG TTCGTCGGCG CAGTGCGCGC TGGGGCTCGG CGTGTTCGAT
TGGCTCGACG CCACGGCGCT GCTGTCGTCG ATGACCATGC TGGCGAATAC CCCGCCATTC
ATGCTGAAAG GGCTGACGCT CGCGGATGTC GGCAGACGGC CGATACGTCC GGGAGCGTGG
ACGCGCTGGC TCACTGTTCG GACCGGTCTC CATATTCGCC AGACCAAATC GTCGATGGCG
CCGCTTCCCG TGCCGCGCGT GGCGAAGCAT GCCGAAAGCG GCATTCGGGA AGGATGGAGC
AGCGCGCGCC ATCTCGTTTC CACTCGTGCG AGCTTCGTGC CGGCGCTCGT GTTCTCCACT
GTTTCGACGC TGGGCATCGC CGTGGCGGTC TCGGGCTGGA TGAACAGCCG CATGATCCAG
CGGGTGTCGA ACGATATCGC GGATTATCGG AGCGGAGCCG ACGAGTGGAT CGGGAGGAAG
CGCTTTGCGC AGGCCCGCCT CGAACACGAT CGCACGGCGA TCGTGCAGAC GCTGCTCGAT
GGCGTACCGA CCGGTTTCGG CTGGGGACTC TACCGGGGGC AGGAGTTGCT GGTCAAGCTC
GATACGGTGC TGGATTCGCC GCGCGCGGCG TCGATCGCGA TGCAGCTCGA CACGGTATCG
CTGTTCGCCG CGGGCAAGGC TACATTTTCT CCGGGCGCCG CGCAGCGTGA GTTGCAACAT
GCATTGCGGA TGATTCTCGC CAATCCGGAA CAACGTGTGC TGATCGTCGG TCATGCAGAC
AGCTCCGGCT CGGATGCGGC CAATTTTCAG TTATCCGAAG CGCGTGCGCG CGCGATTCGT
GACTGGTTCG TCGATCAAGG CGTGCTGAAG ACGCGCTTCA TCGTGCAGGG AGCCGGCGAT
ACGCATCCGA TCGCCGATAA CGACAGCCCT TCGGGACGTG CGCAGAATCG CCGTGTCGAG
GTCTTGCTGA TTCCGGACGT TTCTTCCGAC AGGAAGGCGA GCGGTACGGA ACTATAG
 
Protein sequence
MSRQIRFWLV WGAIPFVVLA SLCLPLRMQP DWSHVLTIVL IIAAIVLAIE IFEHSRETAQ 
DRTAEAEIDD HELAVIIVAG PHASSLFNSS GDDTAFRREA GALWLRADSV EQLRDTMMRV
KASRGRFPDA AVVPLVSESD DESDMRQAFA KWRTELREAL CYPDAAYVLP CYLAVYTCLG
FKGADGARPK WTGDAIEIGT RQMNAASKVG ELLASIRQQL LRPSPTGSSA QCALGLGVFD
WLDATALLSS MTMLANTPPF MLKGLTLADV GRRPIRPGAW TRWLTVRTGL HIRQTKSSMA
PLPVPRVAKH AESGIREGWS SARHLVSTRA SFVPALVFST VSTLGIAVAV SGWMNSRMIQ
RVSNDIADYR SGADEWIGRK RFAQARLEHD RTAIVQTLLD GVPTGFGWGL YRGQELLVKL
DTVLDSPRAA SIAMQLDTVS LFAAGKATFS PGAAQRELQH ALRMILANPE QRVLIVGHAD
SSGSDAANFQ LSEARARAIR DWFVDQGVLK TRFIVQGAGD THPIADNDSP SGRAQNRRVE
VLLIPDVSSD RKASGTEL