| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0150 |
|---|
| Symbol | |
|---|
| ID | 4885963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 130010 |
|---|
| End bp | 130555 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640130091 |
|---|
| Product | fimbrial protein |
|---|
| Protein accession | YP_001061156 |
|---|
| Protein GI | 126443803 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGA AGGTCGTAAG TTTCGCCGTT GCGACATTGT TTGGCCTTGT CGCAGCGCAG
AGCGTGTTTG CACAGTCGAT CGATCAGGGG CAGGTCAAAT TCACGGGTGA GCTGACCGCC
AACACGTGCA CGATCGACGC CGGCAGCAAA GACCAAATCG TTCCCTTGCC GAAAGTTTCC
ACGAGCGCTC TGGCGGCGCC GGGAGATGTC GCTGGTTCGA CGGCCTTTGA AATCAAGGTG
TCGAAGTGCG CTGCGGATGT CAAGAAGGTC GCCGCTCACT TCGAGATGGA AAACATGGAC
CCCAACACGC GTACGTTGAA AAACGAGGCC ACGGGAGCGG ACGCCGCGAC GAACGTGACG
ATTCAACTGG TCAACTCCGA TGGCACCGAA CTGCCGGTAG GTTCGACCGG TAGTTACTTC
GACGTCACCG GAACCGACGA TGCGCGTGGG GCAACCATGA TCTATGGCGG CCAGTACTAC
GCGTTGGATA CAACCACCGC GGGTAAGGTC GAGTCGCACA CGCTCTTCAC GCTTGCCTAC
GAATAA
|
|---|
| Protein sequence | MKKKVVSFAV ATLFGLVAAQ SVFAQSIDQG QVKFTGELTA NTCTIDAGSK DQIVPLPKVS
TSALAAPGDV AGSTAFEIKV SKCAADVKKV AAHFEMENMD PNTRTLKNEA TGADAATNVT
IQLVNSDGTE LPVGSTGSYF DVTGTDDARG ATMIYGGQYY ALDTTTAGKV ESHTLFTLAY
E
|
|---|
| |