| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0125 |
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| Symbol | |
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| ID | 4887510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 105979 |
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| End bp | 107010 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640130065 |
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| Product | putative ABC transporter, periplasmic solute-binding protein |
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| Protein accession | YP_001061130 |
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| Protein GI | 126444028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.961154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CTATTGGGGC AATGTTGCTT GCTGCCGTTG GAACCGCGAC GGCCGCAGAA
CTTCACGTCG GAAGCTGGCC CGTGATTATG CCCGTTGCGC TATTGAAGAA GTTCCAGGCG
GAGACGGGAA TCGAGACGAC GCTTGACACC TACGCGAGCG ATGCAGCGCT AACCCAAAAG
CTGCAGGCTG GTGGCGGTGG GTACGATGTC GTGATCGCCG GCGACTACTA TGTTCCTGTG
CTGGTCAGGT CCGGCCTACT GCTCAAGCTC GATAAGAACA GGCTGTCGAA CATGGCAAAC
ATTAAGCCGG AATACCGCCA TCCGAGCTTT GATTCCGATC GCGACTATGC CGTCCCATTT
ACGGTCGTAC TGACGGGCTT CGCCTATGAC AGCGCGCGTG TGCCCGGTGG GAAACTCGAC
GATAGTTGGA AATCTTTCTT TGAGCCGCCC GAGGCGCTAC GTGGCCAGAT CGGCGATTTG
GACGTCGAAG AGGAACTGTA CATGGCCGCT AGTTGGTATC TGGGACAGGA TGAATGCACA
GAAAATCCTG CTGATGCAAA GAGAGTGCTC GACGTCCTGC AAAAGCAGAA GCCATTCGTG
AAAACGTATA GCAACGACGG TACGGTCGAT CGTCTCGCGT CCCGCCAAAT CGCCGTTCAA
CATGTCTGGA ACGGCGCTGC AGTACGTGCA CAGGAACGCC TCCCGAGCAT CAAGTTCGTC
TATCCAAAGG AGGGCGTTCG CCTGTTCATG GACAGTCTGC TCGTCCCCGC AAAAGCTCGC
AATATCGATT CCGCCTACAA GTTCCTTAAT TGGATGATGC AACCGGAGAA CATCGCGCTG
GTGACGAATG CGGTTCGGTA CAACAACGAG ATCATCGGTT CCGAACGCTA CGTAGATGCA
GCGTTGTTGG ACAACCCGGC AGTCAAGACG CCAGAGCAGT ACAAGGCACG GCTCAGGCCG
TACAAGCTGT GCTCGCTGGC CGCGATTCAG TTACGCAACA AGGTCTGGTT GAAGCTGAAG
GGGAATCGAT AA
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| Protein sequence | MKKAIGAMLL AAVGTATAAE LHVGSWPVIM PVALLKKFQA ETGIETTLDT YASDAALTQK
LQAGGGGYDV VIAGDYYVPV LVRSGLLLKL DKNRLSNMAN IKPEYRHPSF DSDRDYAVPF
TVVLTGFAYD SARVPGGKLD DSWKSFFEPP EALRGQIGDL DVEEELYMAA SWYLGQDECT
ENPADAKRVL DVLQKQKPFV KTYSNDGTVD RLASRQIAVQ HVWNGAAVRA QERLPSIKFV
YPKEGVRLFM DSLLVPAKAR NIDSAYKFLN WMMQPENIAL VTNAVRYNNE IIGSERYVDA
ALLDNPAVKT PEQYKARLRP YKLCSLAAIQ LRNKVWLKLK GNR
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