Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0114 |
Symbol | plcN |
ID | 4886706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 95478 |
End bp | 97673 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640130055 |
Product | non-hemolytic phospholipase C (precursor) |
Protein accession | YP_001061120 |
Protein GI | 126443515 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.267533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTC GTCGCAGATT TCTGCAAGGC ACCGCAACCA CCGGCATCGC GGCCGCCACG TTGGCCGCGT TTCCGCTCAG CATTCGCCGC GCACTCGCGA TTCCCGCCAA CAACCGCACC GGAACCATCC GGGATGTCGA GCACATCGTC ATCCTGATGC AGGAAAACCG CTCGTTCGAC AACTACTTCG GCACGCTGCG CGGCGTGCGC GGCTTTGGCG ACCGCTTCGG CATTCCGCTG CCGAACGCGC TGACGGTCTG GCAGCAGCGC AACGCGACGG GCGCGCTGGT GCTGCCCTAT CACCTGGACG GCAGCAAGGG CAACGCGCAG CGCGTCAGCG GCACGCCGCA CTCGTGGGGC GACGGCCAGA ACGCGTGGGA CGGCGGGCGC ATGTATCAGT GGCCGCGCTA CAAGAACACG GCGTCGATGG GCTACTTCCG GGAGAGCGAG CTGCCGTTCC AGTTCGCGCT CGCGAACGCG TTCACGGTCT GCGATGCGTA CCACTGCTCG ATGCACGCGG GCACCAACTC CAACCGGATG TTCATGTGGA CCGGCACCAA CGGCCCGACC GGCGCGGGCG TGGCCTCGGT GGTGAACGAA TGGGACGACA TCGGTCCCTC CACGTTCGGC TATGAGTGGA AGACCTATCC CGAGCGCTTG CAGGAAGCCG GCGTGAGCTG GAAGGTCTAC CAGAACATGC CGGACAACTT CACCGACAAC GCGCTTGCCG GCTTCAGGCA GTACCGCCGC GCGAACGAGG CGTCGGGCAA GCCGGTGAGC AACAGCGACA AGGTGGTTTC GCCCGCATAC GATCCGGCGA GCGACGACGT TCGCAACCCG CTGTACAAGG GCATCGCCAA CACGATGCCC GACGGCGGCT TCCTCGGCGC CTTCAAGGAA GACATCCGTG CGGGCAAGCT GCCGCAGGTG TCGTGGGTGG TGGCGCCGGC CGCGTATTCC GAGCATCCGG GGCCGTCGAG CCCGGTGCAG GGCGCGTGGT ACATCCAGGA GGTGCTCGAT GCGCTCACCG CGACGCCGGA CGTCTGGAGC AAGACCGTGC TGCTCGTGAA TTTCGACGAG AACGACGGCT ACTTCGACCA CGTGCCTTCG CCGTCGGCGC CGTCGCTGAA TCCGGACGGC TCGCCGGCCG GCAAGACCAC GCTGCCCGAG GCCGACATCG CGTTCGAGCG CTTCACCCAT CCGAAGCCGC CGGGCACCAA GAGCCAGCCG CAGCCCGACG CCCGCGTATA TGGCCCCGGC GTGCGCGTGC CGATGTACGT GATCTCGCCG TGGAGCCGCG GCGGCTGGGT CAACTCGCAG GTGTTCGATC ACACGTCGAC GCTGCGCTTC ATCGAGGCGC GCTTCGGTGT GCGCGAGCCC AATATCTCCG CGTTCCGCCG CGCGGTGTGC GGCGATCTGA CGAGCGCGTT CAACTTCGTG CGACCGAACA ACGAGCCGCT GCCCACGCTG GCGGGGCGCA AGACCCGGGC TCAGGCCGAT GCGCTGCGCG CCGCGCAGCA GCAGATGCCG CAGATCGTGC CGCCTGCGAA CGGCCTATTG CCGCGCCAGG AGACAGGCAC GCGGCCGTCG CGCGCGTTGC CGTACGAACT GCATGTCAAC GCGGTCGCGC GCACGCTCGA CGGCACGCTG CGCCTCGTAT TCGCCAACAC GGGGCAGGCC GCGGCCGTGT TCCACGTCTA CGACAAGCTG AATCTGGGTC GCCTGCCGCG CCGATACATG GTCGAGGCCG GCAAGCAGCT CGACGACGTC TGGGCCGCGA TGACGGACAA CGGCGGCAAG TACGACCTGT GGGTGCTCGG GCCCAACGGC TTGCACCGCC ATTTCACCGG CGATATGAAC CGCCTGCGCG CGGGCGGCGC GCCCGTGCCC GAAGTGCGGG CGGAGTACGA CCGCCAGCAC GGCAACGTGC AATTGCTGTT GCGTAACGAA GGGGCGCGCG AGTGCGTGTT CACCGTGCGC GCGAAGGCGT ACCGCGACGA TGGTCCGTGG ACCTTCAAGG TCAAGGGCGG CGCCGAGCGC AAGCATCACT GGAAGCTGGA CGGCAGCGGC AATTGGTACG ACTTCGTCGT GACCTGCGAC GCCGACACCG GTTACTCGCG CCGCTTCGCC GGGCGGGTAG AAACCGGCGA GCACTCCGTC AGCGATCCGG CGATGGGGTT CGGCGATCGG TTCTGA
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Protein sequence | MNARRRFLQG TATTGIAAAT LAAFPLSIRR ALAIPANNRT GTIRDVEHIV ILMQENRSFD NYFGTLRGVR GFGDRFGIPL PNALTVWQQR NATGALVLPY HLDGSKGNAQ RVSGTPHSWG DGQNAWDGGR MYQWPRYKNT ASMGYFRESE LPFQFALANA FTVCDAYHCS MHAGTNSNRM FMWTGTNGPT GAGVASVVNE WDDIGPSTFG YEWKTYPERL QEAGVSWKVY QNMPDNFTDN ALAGFRQYRR ANEASGKPVS NSDKVVSPAY DPASDDVRNP LYKGIANTMP DGGFLGAFKE DIRAGKLPQV SWVVAPAAYS EHPGPSSPVQ GAWYIQEVLD ALTATPDVWS KTVLLVNFDE NDGYFDHVPS PSAPSLNPDG SPAGKTTLPE ADIAFERFTH PKPPGTKSQP QPDARVYGPG VRVPMYVISP WSRGGWVNSQ VFDHTSTLRF IEARFGVREP NISAFRRAVC GDLTSAFNFV RPNNEPLPTL AGRKTRAQAD ALRAAQQQMP QIVPPANGLL PRQETGTRPS RALPYELHVN AVARTLDGTL RLVFANTGQA AAVFHVYDKL NLGRLPRRYM VEAGKQLDDV WAAMTDNGGK YDLWVLGPNG LHRHFTGDMN RLRAGGAPVP EVRAEYDRQH GNVQLLLRNE GARECVFTVR AKAYRDDGPW TFKVKGGAER KHHWKLDGSG NWYDFVVTCD ADTGYSRRFA GRVETGEHSV SDPAMGFGDR F
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