Gene BURPS668_A0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0049 
Symbol 
ID4886889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand- 
Start bp42374 
End bp42994 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID640129990 
ProductLysE family protein 
Protein accessionYP_001061055 
Protein GI126443319 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.751253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGA TCGCTTTTTC TCACGGCGCG ATGCTCTGCG CATCGCTCAT CGTCACCATC 
GGCGCGCAGA ATGCGTTCAT CCTCCGGCAG GGCATCATGC GTTCGCACGT CGGCAAGATC 
GTCCTGCTCT GCACGCTGTC GGACATGCTG CTGATCGGCG CGGGCGTCGG CGGCGCATCG 
GTGCTCGTCG AGCGCTATCC GGCCTTCGTT CATGCCGTGC TGTATGTCGG CCTCGCCTAT 
CTCGCATGGT TCGGCCTGAG CGCGCTGCGC CGCGCGTTCA AGCCCGGCCA CGAAACGCTC 
GATGCGACGG GCGCGGTTGC CGCGCCGCCC GCGCAGCGCG CCTGGCCGAT CGTGCTGATG 
ACGCTCGCGT TCACATGGCT CAACCCGCAC GTCTATCTGG ACACGTTCCT GCTGATCGGC 
ACGGCCGGCG CGCGCGAGCC GGAAGGCGCG CGCGGCGCGT TCGCGATCGG CGCGATGGCG 
GTCAGCGCGG TATGGTTCGT CGCGCTCGGA TACGGCGCGC GATTGCTCGC GCCATGGTTC 
AAGCGCGCGC TCGCGTGGCG CGTGCTCGAC GGCGCGATCG GCGGCATGGT GCTGTTTCTC 
GCGGCGGTGC AGTTGCGCTA A
 
Protein sequence
MNWIAFSHGA MLCASLIVTI GAQNAFILRQ GIMRSHVGKI VLLCTLSDML LIGAGVGGAS 
VLVERYPAFV HAVLYVGLAY LAWFGLSALR RAFKPGHETL DATGAVAAPP AQRAWPIVLM 
TLAFTWLNPH VYLDTFLLIG TAGAREPEGA RGAFAIGAMA VSAVWFVALG YGARLLAPWF 
KRALAWRVLD GAIGGMVLFL AAVQLR