| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0033 |
|---|
| Symbol | |
|---|
| ID | 4885772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 23433 |
|---|
| End bp | 24437 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640129974 |
|---|
| Product | helix-hairpin-helix DNA-binding motif-containing protein |
|---|
| Protein accession | YP_001061039 |
|---|
| Protein GI | 126443025 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000119331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCAAG CAGACCTTGT TCCATATTTC GGAACGCGCA GTCGAGTTTC TGAGGTCCTT
TCCAGGAAGC GACCTCTGAC GGTGCAAATG ATTCGCGCTC TGTCCGTCGG ACTTGGGATA
TCCGCAGAGA CGCTTGTTGG TGCAAACTCC ATCGATTCCG ATGCGTCAAA GAAAGAAGAC
GTCGATTGGT CTCGGTTCCC TGTCAAGGAG ATGGTTGCCC GCGGCTGGCT GAAGAAACTT
GCATCGCAGG CAGTTGGCTC AACCGAGGAT TTAGTGAAGG GCTTTATCTC AAGTGCAGGA
CTGCAATTCG GTACCGCCGC TTTTCGCCGA GGAATGAGCG GTGACGCGTA CTCGCCGAGC
ACGATGTACT CACTGTACGC GTGGCTTTCA AGGGTAATTC AACGCGGGCG TGAACGAAAA
GCGAGCCTTG GGAAATATGA TCCGTCGATG TTCTCTGCCG CATTTCTGCG TGAGCTTGCA
CAACTGAGTT GGTCAGAGCA TGGACCGCTA CTTGCGGTTG AATATCTTGA GCGTAGAGGT
ATTGCTGTCG TTGTTGAGCC ACATTTGAAA GGAACGTTGC TTGATGGCGC AGCACTCAAA
GATGCGGACG GCACTCCGAT CATTGGACTG ACTTTGCGGT TTGACCGACT GGACAGTTTC
TGGTTTACAT TACTGCATGA GGTTGCTCAT ATCTGGAAAC ACGTTGGTCA TGATGAAACT
TTTTTGGACA ATCTTGACGT GTCGCCAGAA GACAAACGCG AGCTGGAGGC GAACCGTCTG
GCCAAAGAGG CACTGATACC ACGTGTTGCG TGGAAGCGTA GTGATGCATA TCTAAATCCG
AGTCCAGAGA CCATCGACAA GCTTTCTCGA GAACTCAAGA TTCACCCGGC AATCATCGCA
GGTCGTTTGA GGAAAGAATC CGAAAACTAC AAGCTCTTCA ATGAGCTTAT CGGATACAAC
GAAGTACGGA AGCACTTTAA TCTAACCGCA AGTTCAGAGG TTTGA
|
|---|
| Protein sequence | MRQADLVPYF GTRSRVSEVL SRKRPLTVQM IRALSVGLGI SAETLVGANS IDSDASKKED
VDWSRFPVKE MVARGWLKKL ASQAVGSTED LVKGFISSAG LQFGTAAFRR GMSGDAYSPS
TMYSLYAWLS RVIQRGRERK ASLGKYDPSM FSAAFLRELA QLSWSEHGPL LAVEYLERRG
IAVVVEPHLK GTLLDGAALK DADGTPIIGL TLRFDRLDSF WFTLLHEVAH IWKHVGHDET
FLDNLDVSPE DKRELEANRL AKEALIPRVA WKRSDAYLNP SPETIDKLSR ELKIHPAIIA
GRLRKESENY KLFNELIGYN EVRKHFNLTA SSEV
|
|---|
| |