| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_4007 |
|---|
| Symbol | |
|---|
| ID | 4885377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3908871 |
|---|
| End bp | 3909434 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640129935 |
|---|
| Product | SET domain-containing protein |
|---|
| Protein accession | YP_001061000 |
|---|
| Protein GI | 284159922 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2940] Proteins containing SET domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCG CGATCGTTTC AGTTTCAAGT CGTCTTCAAA GGATTCGTTC GATGAGTTCA
CGCAGGATCG TGGTACGCCG CTCGGGCGTT CACGGCAAGG GCGTATTCGC CGCGGTACCG
ATCAAGGCGG GAGAGCGCGT AGTCGAATAC AAGGGCGAGC GGATCTCGTG GAAAGAGGCG
CTGCGCCGCC ATCCGCACGA CCCGGACGAT CCGAATCACA CGTTTTACTT CGCGCTGGAA
GAGGGCGGGG TGATCGACGG CAAGATCGAC GGCAACAGCG CGCGCTGGAT CAACCATTCG
TGCGCGCCGA ACTGCGAAGC CGAGGAAGTG GGCGGGCGCG TGTACATCCA TGCGCTGCGT
GACATCGACG AGCAGGAAGA ACTGTTCTAC GACTACGGTC TCGTGATCGA CGCGCGCCTG
ACGAAAAAGC TCAAGCGCGA ATACGCGTGC CATTGCGGCG CGGCGACGTG CCGCGGCACG
CTGCTTGCAA CGTCGGAAGA AGACGAAGGC AAGAAAAAGA AGAAGGCGAA GAAAGGCGGC
AAGGACAAGA AAAAGAAGAA GTGA
|
|---|
| Protein sequence | MRGAIVSVSS RLQRIRSMSS RRIVVRRSGV HGKGVFAAVP IKAGERVVEY KGERISWKEA
LRRHPHDPDD PNHTFYFALE EGGVIDGKID GNSARWINHS CAPNCEAEEV GGRVYIHALR
DIDEQEELFY DYGLVIDARL TKKLKREYAC HCGAATCRGT LLATSEEDEG KKKKKAKKGG
KDKKKKK
|
|---|
| |