| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3995 |
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| Symbol | |
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| ID | 4881698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | - |
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| Start bp | 3898346 |
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| End bp | 3900031 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640129923 |
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| Product | GMC family oxidoreductase |
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| Protein accession | YP_001060988 |
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| Protein GI | 126439751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.530618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTACCG AACGTACGCT CGAAGGCGAA TTCGATTATG TGATCGTCGG CGCCGGCACG
GCGGGCTGCG TGCTCGCGAA CCGGCTCACC GAGGATCCGG AGGTGACCGT GCTGCTGCTC
GAAGCCGGCG GCAGGGACGA CTATCACTGG ATCCACATCC CGGTCGGCTA TCTGTATTGC
ATCGGCAATC CGCGCACCGA CTGGCTCTAC AAGACCGAGC CCGAAGCGGG CCTGAACGGC
CGCGCGCTGT CGTATCCGCG CGGGCGCGTG CTGGGCGGCT CGTCGTCGAT CAACGGAATG
ATCTACATGC GCGGCCAGCG CGGCGATTAC GACGACTGGG CGCGCGCCAC GGGCGACGCG
GGCTGGTCGT GGGACAGTGT GCTGCCCGTC TTCAGGCGCA GCGAGGATCA TCATGCGGGC
GCGACCGACA TGCACGGCGC GGGCGGCATG TGGCGCGTCG AGAAGCAGCG GCTGCGCTGG
GAGATTCTCG AGGCATTCTC GCAGGCCGCG CAGCAGACGG GCATTCCGGC CACCGACGAT
TTCAACCGCG GCGACAACAC GGGCGTCGGC TATTTCGAAG TCAATCAGAA GCGCGGCATT
CGCTGGAACG CGTCGAAGGC GTTCTTGCGT CCCGCGCTCG CGCGGCCGAA CCTCACGGTG
ATCACCGGCG CGCAGGCCGA GCGGCTCGTG TTCGACGGCA AGCGCTGCGC GGGGGTCGAA
TATCGCGGCG GCGGCGCGCC GTTCGTCGCG CGCGCGCGCG TCGAGGTGCT CGTCGCGTCG
GGCGCGGTGA ATTCGCCGCA GTTGCTCGAA TTGTCGGGCA TCGGCGACGG CAGCCGGCTG
CAGGCGCTCG GCATCGGCGT CGTCGCGGAT CTGCGCGGCG TCGGCGAAAA TCTTCAGGAT
CACTTGCAGT TGCGCATGGC GTTTCGCGTG CGCGGCGTGC GCACGCTGAA CACGCTGTCC
GCGCACTGGT GGGGCAAGCT GTGGATCGGC GCGCAATACG CGCTGATGCA GCGCGGGCCG
ATGTCGATGG CGCCGTCGCA ATTGGGCGCG TTCGCGAAAT CGGACCCGAA CGATCCGGCA
CTCGCGCGGC CCGATCTCGA ATATCACGTG CAGCCGCTGT CGCTCGAGCG CTTCGGCGAG
CCGCTGCATC GCTTCAACGC GTTCACCGCG TCGGTCTGCC ATCTGCGGCC GACGTCGCGC
GGCAGCGTCC ATGCGGCGTC GCCGGATCCG GCGCGCGCGC CGTCGATTGC GCCGAACTAT
CTGTCGACCG ATTACGATCG CCATGTCGCG GCGAACGCGC TGCGCCTGAC GCGCCGGATC
GCCTCGGCGC CCGCGCTCGC GCGCTATGCG CCCGAAGAAA TCCTGCCGGG CGCCCGGTAT
GTGAGCGAAG CGGAGCTGAT CGCCGCGGCG GGCGCCGTGG GCACGACGAT TTTCCATCCG
GTCGGCACGT GCCGGATGGG GCGCGCCGAC GATCCGGACG CCGTCGTCGA CAGCCGCCTG
CGCGTGCGCG GCGTGACGGG GCTGCGGGTC GTCGACGCGT CGGTGATGCC GACGATCACG
TCGGGCAACA CGAACTCCCC GACGCTGATG ATCGCCGAGC GCGCGAGCGA CATGATTCGC
GCGGATCGCC GCGGCGCATC GGAGCGCGGC GCGAGCGCGC GCGCCGAAGC CGTGCTGCCG
ACGTAA
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| Protein sequence | MTTERTLEGE FDYVIVGAGT AGCVLANRLT EDPEVTVLLL EAGGRDDYHW IHIPVGYLYC
IGNPRTDWLY KTEPEAGLNG RALSYPRGRV LGGSSSINGM IYMRGQRGDY DDWARATGDA
GWSWDSVLPV FRRSEDHHAG ATDMHGAGGM WRVEKQRLRW EILEAFSQAA QQTGIPATDD
FNRGDNTGVG YFEVNQKRGI RWNASKAFLR PALARPNLTV ITGAQAERLV FDGKRCAGVE
YRGGGAPFVA RARVEVLVAS GAVNSPQLLE LSGIGDGSRL QALGIGVVAD LRGVGENLQD
HLQLRMAFRV RGVRTLNTLS AHWWGKLWIG AQYALMQRGP MSMAPSQLGA FAKSDPNDPA
LARPDLEYHV QPLSLERFGE PLHRFNAFTA SVCHLRPTSR GSVHAASPDP ARAPSIAPNY
LSTDYDRHVA ANALRLTRRI ASAPALARYA PEEILPGARY VSEAELIAAA GAVGTTIFHP
VGTCRMGRAD DPDAVVDSRL RVRGVTGLRV VDASVMPTIT SGNTNSPTLM IAERASDMIR
ADRRGASERG ASARAEAVLP T
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