Gene BURPS668_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3985 
Symbol 
ID4883839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3888562 
End bp3889617 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID640129913 
Productputative amino acid uptake ABC transporter, permease protein 
Protein accessionYP_001060978 
Protein GI126441722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCT CCATCGCGGC AATTCTTGCG CAGGACGGCA TCACGACGGG CGCGATCTAC 
GCGCTACTGT CGCTCGCACT CGTGCTCGTC TTTTCCGTCA CGCGCGTGAT CTTCATCCCC
CAAGGCGAAT TCGTCACCTA TGGCGCGCTG ACGCTGGCCG CGCTACAGGC GCAGAAATTT
CCGGCAACCT GCTGGCTGCT GTTCGTCGCC GGCATCGCCT GCTTCATGCT CGAAGTGGGC
GGGCTGATCC GGCATCGCGC GCGTCGCCGC CGGTTCGCCC GCACGCTGAC GACGCTGGCG
AGCCGCTACG TGCTGCTGCC GCTCGCGATC TACGCGGTGA CGAGAAGCGC CGCCGCGCAG
CCGTTGCCGA TGATCGCGCA GATCGCGCTC ACGCTTGCGA TCGTCGTGCC GCTCGGGCCG
TTCATCTACC GGCTCGCGTA TCAGCCGATC GCCGAAGGCA CGACGCTGCT GCTGCTGATC
GTATCGGTTG CCGTGCATTT CGCGTTGGTC GGGCTCGGGC TGGTCATGTT CGGCGCGGAA
GGCTCGCGCA CGACCGCGTT CTCGGATACG TCACTCGCGC TCGGCAGCCT GTCGATCTCG
ATGCAGAGCG CCTGGGTGGT CGGCACCGCG CTCGTGCTGA TCGCGGCGCT CTATTTGTAT
TTCGAACGCA CGTTGCCCGG CAAGGCGCTG CGTGCGACGT CGGTAAACCG TCTCGGCGCG
CGGCTCGTCG GCATCGGCAC GACCGAGGCA GGGCGGCTCG CGTTCACGCT CGCGGCCGGG
CTCGGCGCGT TGTCGGGCGT ACTCGTCGGG CCGCTGACGA CGATCTACTA CGATTCCGGC
TTCCTGATCG GCCTGAAAGG CTTCGTCGGC GCGATCATCG GCGGGCTCGT CAGCTATCCG
CTGGCCGCGG CCGGATCGCT TCTCGTCGGC GTGTTGGAGT CGTACTCGTC GTTCTGGGCG
AGCGCGTACA AGGAAGTAAT CGTTTTCACG CTGATTGTGC CGGTGCTGCT GTGGCGCAGC
CTTGCGGCGC CGCAAACGGA AGACGAGGAG GCGTGA
 
Protein sequence
MDFSIAAILA QDGITTGAIY ALLSLALVLV FSVTRVIFIP QGEFVTYGAL TLAALQAQKF 
PATCWLLFVA GIACFMLEVG GLIRHRARRR RFARTLTTLA SRYVLLPLAI YAVTRSAAAQ
PLPMIAQIAL TLAIVVPLGP FIYRLAYQPI AEGTTLLLLI VSVAVHFALV GLGLVMFGAE
GSRTTAFSDT SLALGSLSIS MQSAWVVGTA LVLIAALYLY FERTLPGKAL RATSVNRLGA
RLVGIGTTEA GRLAFTLAAG LGALSGVLVG PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP
LAAAGSLLVG VLESYSSFWA SAYKEVIVFT LIVPVLLWRS LAAPQTEDEE A