Gene BURPS668_3982 details

Gene Information

• Locus tag: BURPS668_3982
• Symbol: gidA
• ID: 4884648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 3883880
• End bp: 3885853
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640129910
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001060975
• Protein GI: 126440375
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.667295
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTATC CCACTGAATT TGACGTCATC GTCGTCGGCG GCGGTCATGC CGGCACGGAG 
GCCGCATTGG CTTCCGCACG CATGGGCGCC AAGACGCTCC TGCTGACGCA CAACATCGAA 
ACCCTTGGGC AGATGAGCTG CAACCCGTCG ATCGGCGGGA TCGGCAAGGG CCATCTGGTC 
AAGGAAGTCG ACGCGCTTGG TGGTGCGATG GCGGCTGCCA CAGACGAAGG CGGCATCCAG 
TTCCGCATTC TGAATTCGTC GAAGGGGCCG GCGGTCCGTG CGACGCGCGC TCAGGCAGAT 
CGCGTGCTGT ACAAGCAGGC GATCCGCCGT CGTCTGGAGA ATCAGCCGAA TCTGTGGTTG 
TTCCAGCAGG CTGTCGACGA TCTGATGGTG GAGGGGGACC GGGTTGTCGG TGCCGTTACC 
CAGGTTGGCG TCCGGTTCCG GGCGCGCGCG GTGGTATTGA CTGCCGGTAC GTTCCTGGAC 
GGCAAGATCC ATGTCGGGCT CAATCACTAT ACGGGCGGTC GCGCGGGTGA TCCGGCGGCC 
GTGTCCTTGT CGTCGCGGCT GAAGGAACTG AATCTGCCGC AAGGGCGGCT GAAGACCGGA 
ACGCCACCGC GCATCGACGG CCGAACGATC GATTTCTCGA AGCTCGACGA GCAGCCAGGC 
GATCTTGATC CGATTCCGGT GTTCTCGTTC CTTGGCCGGG CCGAGCAGCA CCCCCAACAG 
TTACCGTGCT GGGTCACGCA CACCAACGAG CGCACGCACG ACATTATCCG CAGCGGCCTC 
GATCGTTCGC CGATGTATAC GGGCGTCATC GAAGGCGTGG GGCCCCGCTA TTGCCCGTCG 
ATCGAGGACA AGATTCATCG CTTTGCGTCG AAAGATTCGC ATCAGATCTT TCTTGAGCCG 
GAAGGGCTGA CGACCAACGA GTTCTATCCG AACGGTATTT CAACCAGCTT GCCGTTCGAT 
GTGCAGCTTG CGCTCGTGCA TTCGATGCGA GGTTTGGAAC AGGCGCATAT CCTGCGCCCA 
GGTTATGCAA TCGAGTACGA TTATTTCGAT CCCCGCGCGC TGAAATCGTC GCTCGAAACC 
AAGGCAATTG GCGGTCTATT CTTTGCGGGG CAAATCAACG GCACGACCGG CTATGAAGAA 
GCCGCTGCAC AAGGCCTGCT CGCGGGCATC AACGCGGGCC GCTATGCACA GGAAAAAGAC 
GCATGGTGTC CGCGGCGGGA TCAGGCGTAT CTCGGTGTGC TCGTCGATGA TCTGGTGACG 
CGCGGCGTAT CCGAGCCTTA TCGGATGTTC ACGAGCCGCG CCGAATATCG GCTCAGCCTC 
CGCGAGGACA ACGCGGACAT GCGTCTGACC GAAATCGGGC GTGAATTGGG TGTCGTCGAC 
GACGTTCGCT GGGACGCATT TAACCGAAAG CGCGATGCTG TTTCACGTGA AACCGAACGG 
CTGCGCACGA CGTGGGTAAC GCCGAAGACG TTGCCGGTCG ACGAAGCCAC CGCGCTGCTC 
GGCAAGCCGA TCGATCACGA ATACAGTCTC GCGGAGCTGC TACGCCGGCC GGGCGTCAGC 
TATGACGGCG TGTGCGGTTT GCGTGGCGGC GAGTGTGGCC CATCCGAACC GCTGGCCGAA 
GACGAACTGT TGCTTGCGCA GATCAAGGAG CAGATTGAGA TCGGCATCAA GTACCAGGGC 
TATATCGAGC GTCAGGCCGG CGAAATCGAA CGGAATGGTG CAAACGAAAA TACGCGATTG 
CCTGACGGGA TCGACTACAC GGAGGTGCGT GGCTTGTCGT TCGAAGTCAG TCAGAAGCTG 
AACCAATTCC GCCCGGAAAC GATCGGGCAG GCATCGCGGA TCTCGGGCAT GACGCCCGCT 
GCCATCTCGC TGCTGATGGT GCATCTGAAG AAGCGCGGGC TGGGCCGGCG AAAGGGCACG 
GACAGTGTAC CGGGCGCCGA CGTGCAAGCC GACAACACTG CGGCGCAACA ATGA 

 

Protein sequence

MLYPTEFDVI VVGGGHAGTE AALASARMGA KTLLLTHNIE TLGQMSCNPS IGGIGKGHLV 
KEVDALGGAM AAATDEGGIQ FRILNSSKGP AVRATRAQAD RVLYKQAIRR RLENQPNLWL 
FQQAVDDLMV EGDRVVGAVT QVGVRFRARA VVLTAGTFLD GKIHVGLNHY TGGRAGDPAA 
VSLSSRLKEL NLPQGRLKTG TPPRIDGRTI DFSKLDEQPG DLDPIPVFSF LGRAEQHPQQ 
LPCWVTHTNE RTHDIIRSGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS KDSHQIFLEP 
EGLTTNEFYP NGISTSLPFD VQLALVHSMR GLEQAHILRP GYAIEYDYFD PRALKSSLET 
KAIGGLFFAG QINGTTGYEE AAAQGLLAGI NAGRYAQEKD AWCPRRDQAY LGVLVDDLVT 
RGVSEPYRMF TSRAEYRLSL REDNADMRLT EIGRELGVVD DVRWDAFNRK RDAVSRETER 
LRTTWVTPKT LPVDEATALL GKPIDHEYSL AELLRRPGVS YDGVCGLRGG ECGPSEPLAE 
DELLLAQIKE QIEIGIKYQG YIERQAGEIE RNGANENTRL PDGIDYTEVR GLSFEVSQKL 
NQFRPETIGQ ASRISGMTPA AISLLMVHLK KRGLGRRKGT DSVPGADVQA DNTAAQQ