Gene BURPS668_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3954 
Symbol 
ID4885511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand- 
Start bp3854575 
End bp3855273 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID640129882 
ProductTetR family transcriptional regulator 
Protein accessionYP_001060947 
Protein GI126440454 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCGC GACATGTTCA GGTTTCGGCG CCGCCCGACA AATCGATTGC GCAGCCGCAG 
CCGGCCTTGC GCCGCCGCCC GCGGCAGCGT CGCGCGCAAG CGAGCTCGGC GGCGCTGCAG 
CAGGCGTTTG TTCGGGTTTT GCTCGAGCGC GGCTACGCGA AGGCGACGAT TCGCGAGATC 
GCGGCGGTCG CGGGCGTGAG CGTCGGCACG TTCTACGAGT ATTTCGGCGA CAAGGAGAGC 
CTCGCCGCGC TCACGATCCA CCATTACGTG AAGACGCTCG CGACGCGGAT GCGCGCGGTC 
GTCGACGCGC GGCGCGGCGA GCGCGGCCGG GCGGTGGCGG CCGCGCTCAT CGATGCGCAG 
GTCGACGCGA TCGAGCAGGA CCCGTGCGTG TGGGCCGCGA TGTTTGCGAT CGAGCGCAAG 
GTCTCGCCGA TCGACGCATA TCGTCGGCAT TACGACGACT ACGTCGCGTT GTGGCGCGAT 
GCGCTCGCCG GCGCGAGCGA TGCGCCGGCC GATGCGCGGC TCGACGTGAC CGCGCGCGTC 
GCGCATGCGC TGTGCTACGG GTGGGTGTCG CAATCGCTGC TGACGCAGGG CGCGAAGGTC 
GATGTCGCGC AACTGCGAGA CGAATTGCAT CGGGCGGCGG GGGCGTATCT CGCGGCTGCG 
ATGGATGGCG GCGCGGGAGG CGGCGCGGCC GGCGGGTGA
 
Protein sequence
MTSRHVQVSA PPDKSIAQPQ PALRRRPRQR RAQASSAALQ QAFVRVLLER GYAKATIREI 
AAVAGVSVGT FYEYFGDKES LAALTIHHYV KTLATRMRAV VDARRGERGR AVAAALIDAQ 
VDAIEQDPCV WAAMFAIERK VSPIDAYRRH YDDYVALWRD ALAGASDAPA DARLDVTARV 
AHALCYGWVS QSLLTQGAKV DVAQLRDELH RAAGAYLAAA MDGGAGGGAA GG