Gene BURPS668_3947 details

Gene Information

• Locus tag: BURPS668_3947
• Symbol: cadR
• ID: 4885178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 3849666
• End bp: 3850097
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640129875
• Product: Cd(II)/Pb(II)-responsive transcriptional regulator
• Protein accession: YP_001060940
• Protein GI: 126440355
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG GCGAACTGGC GAAAGCGGCG CGGTGCACGC CGGAAACGAT TCGCTTCTAT 
GAAAAAGAGG GGCTGATGCC CGACGCGGAA CGGACCGATT CCAACTACCG CCACTACACC 
GACGCGCACG TCGAGCGGCT GCGCTTCATC CGCAACTGCC GCGCGCTCGA CATGACGCAC 
GATGAAATCC GCGCACTGCT GCGCTTCACC GACGACCCGG CGGACCGCTG CGATTCGGTC 
AACGCGCTGC TCGACGAACA CATCGGCCAC GTCAACACGC GGCTTGCCGA ACTGCAGCAT 
TTGCGCATGC AATTGATCGA ATTGCGCGAA CGGTGCCAGG GCGAGCACGC AGTCGAGGAT 
TGCGGCATCG TGCATGGCCT CGCGACGATG GAAACGCCGG ACATGCCCGG CAAACGCTCG 
CACGTCGGCT GA 

 

Protein sequence

MKIGELAKAA RCTPETIRFY EKEGLMPDAE RTDSNYRHYT DAHVERLRFI RNCRALDMTH 
DEIRALLRFT DDPADRCDSV NALLDEHIGH VNTRLAELQH LRMQLIELRE RCQGEHAVED 
CGIVHGLATM ETPDMPGKRS HVG