Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3898 |
Symbol | |
ID | 4884587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3796207 |
End bp | 3796908 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640129826 |
Product | chitin-binding domain-containing protein |
Protein accession | YP_001060892 |
Protein GI | 284159913 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.633676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTCCA GCGTTGGTCT TGCCGATGTT CGGCACGTTT GCAGCCAAGG AGGCGAAATG AGCACTACCG ATTTGAGAAG CGCAACGAAG TCTTCGTCCA TTTCTCCGCG GCATGGCCGC GTCATCACGC CCGAGTCGCG CGCCGTGTAT CTCTACGAAG CAGGAAGGCT CGATTTCGGG CAGGTCAATG AGCTGGAGGG CGGCAAATTC TTTCCCGCGA CCCAAAGCGG GCTCAGAGAT CCGGACGCGC CGGACGACGT CGCCAACGGC ATGCCGCCGC GCGACGGCGA AATCGCGAGC GGCGGGCGCA CGGCGGATGC CCGCGCGCAA CTCAACGAAC CCGATTCCGT TGCGCATTGG CAGAAGCACG CGGTGCGATC GGGGCAATCG CTGCAAATCT CGTGGTCGTA TTCGATGCCG CACAAGACGC GGCGCTGGAC CTACTGGATC ACGAAGCCGG GATGGGACAC CCAGGCGCGG CTTGCGCGCG CGCATTTCGA GCCCGATCCG CTGAAGGTCT ACCTGAACAC GTATCAGCCG TACTGGGGGC CGGATGCGGA CAAGGAGTTG ATCCCCCAGG GCGAGACGAT TCACGAATTC AATCTGCCGA CTCGCACCGG CTATCACGTA CTGCTCGCGG TGTGGGACGT CGCCGATACC GCCAACGCGT TCTATCAGGT GATCGATCTG AATTTCGCGT GA
|
Protein sequence | MASSVGLADV RHVCSQGGEM STTDLRSATK SSSISPRHGR VITPESRAVY LYEAGRLDFG QVNELEGGKF FPATQSGLRD PDAPDDVANG MPPRDGEIAS GGRTADARAQ LNEPDSVAHW QKHAVRSGQS LQISWSYSMP HKTRRWTYWI TKPGWDTQAR LARAHFEPDP LKVYLNTYQP YWGPDADKEL IPQGETIHEF NLPTRTGYHV LLAVWDVADT ANAFYQVIDL NFA
|
| |