| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3821 |
|---|
| Symbol | |
|---|
| ID | 4882075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3725587 |
|---|
| End bp | 3726279 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640129749 |
|---|
| Product | rare lipoprotein A family protein |
|---|
| Protein accession | YP_001060815 |
|---|
| Protein GI | 126440537 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.577854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCC GGATCGCATT CGTAGCGACA CGATCCGTAC AAGCAGGCGA CACGTCGATG
AAATTTCGAT TACCGAGGCA TCTCGGGACT CTAGCTGTAT TTTTCGCGCT GACAGGCTGC
GCGGTGCCGC CGAACGCACC GACCTCCGAG CAGGCGAAAA GCGCCGCGTC GAAGGATGCG
CTGCGCACGG CCGCATCGGG CGCGGCCAGC AACAATAAGG AATCGGCGGG CGCGCCGCTG
AACTTCGACA CGGCGCTCGC CTCGATGCCG GCCGCCGGCT CGCAGGACGC CTCGCGCCAA
TCGCTCGCGG ACGCGAAGCC GATCGATGCC GCGGACATCT CGGATTTCCG GCAGACCGGC
CGCGCGTCAT GGTACGGCAA GGGTTTTCAC GGCCGCCGCA CCGCGAACGG CGAACGCTTC
AACATGAACG AATTCACCGC CGCGCACCGG ACGCTGCCGC TCGCGTCATA CGTGCGCGTG
ACGAACCAGG CGAACGGCAA GTCCGTCGTC GTGAAGATCA ATGATCGCGG TCCGTTCTCG
CGCGGGCGGA TCCTCGATCT GTCGTACGCG GCCGCGAAGG TGATCGGCCT GGTCCATGCG
GGTACCGCGC GCGTGAAGAT CCAGGGGCTC TCGCCTGAAG AGGCGCGCGT CGCGCGCGAC
GAGATGCTCG CGTCGAACAG CACGACGAAG TAA
|
|---|
| Protein sequence | MSVRIAFVAT RSVQAGDTSM KFRLPRHLGT LAVFFALTGC AVPPNAPTSE QAKSAASKDA
LRTAASGAAS NNKESAGAPL NFDTALASMP AAGSQDASRQ SLADAKPIDA ADISDFRQTG
RASWYGKGFH GRRTANGERF NMNEFTAAHR TLPLASYVRV TNQANGKSVV VKINDRGPFS
RGRILDLSYA AAKVIGLVHA GTARVKIQGL SPEEARVARD EMLASNSTTK
|
|---|
| |