Gene BURPS668_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3729 
SymbolrpsE 
ID4884670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3649432 
End bp3649950 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID640129657 
Product30S ribosomal protein S5 
Protein accessionYP_001060733 
Protein GI126440148 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00614597 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA TGCAAGCGAA AGTTCAGGCT GACGAGCGCG ACGACGGCCT TCGCGAAAAA 
ATGATTTCGG TCAATCGCGT GACCAAGGTC GTGAAGGGTG GCCGTATTCT CGGCTTCGCC
GCACTGACCG TGGTCGGCGA TGGCGACGGC CGCGTCGGCA TGGGCAAGGG CAAGGCGAAG
GAAGTGCCGG TCGCCGTTCA GAAGGCGATG GAGCAGGCCC GCCGCAACAT GTTCAAGGTG
CCGCTGAAGA ACGGTACGCT GCAGCACGAA GTGCACGGCA AGCACGGCGC GTCGACGGTT
CTCCTCGCGC CGGCGAAGGA CGGTACCGGC GTGATCGCCG GCGGCCCGAT GCGCGCGGTG
TTTGACGTGA TGGGCGTGCA GAACGTCGTC GCGAAGAGCC ACGGCTCGAC GAACCCGTAC
AACCTCGTTC GCGCGACGCT GGACGGCCTG CGCAAGCAGT CGACCCCGGC CGACATCGCG
GCGAAGCGCG GCAAGTCCGT CGAAGAAATT TTGGGCTAA
 
Protein sequence
MAKMQAKVQA DERDDGLREK MISVNRVTKV VKGGRILGFA ALTVVGDGDG RVGMGKGKAK 
EVPVAVQKAM EQARRNMFKV PLKNGTLQHE VHGKHGASTV LLAPAKDGTG VIAGGPMRAV
FDVMGVQNVV AKSHGSTNPY NLVRATLDGL RKQSTPADIA AKRGKSVEEI LG