Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3726 |
Symbol | secY |
ID | 4884303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3647380 |
End bp | 3648726 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640129654 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001060730 |
Protein GI | 126440036 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0105177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAACA GCCCGAGTCT CGCAAAACCC GGTCGAAGCA CGGCGAAGTT CGGCGATCTG CGCCGGCGTG CAATGTTCTT GCTGCTGGCG CTGATCGTCT ATCGCATCGG CGCGCACATC CCGGTGCCGG GCATCGACCC GGATCAGCTG GCGAAGCTGT TCCAGAGCCA GGCGGGCGGC ATCCTGGGCA TGTTCAACAT GTTCTCGGGT GGCGCGCTGT CGCGCTTCAC GATCTTCGCG CTGGGGATCA TGCCGTACAT TTCGGCGTCG ATCATCATGC AACTGATGGC GATCGTGTCG CCGCAGCTCG AGGCGCTGAA GAAGGAAGGG CAGGCCGGAC AGCGGAAGAT CACGCAGTAC ACGCGGTATT TCACCGTGGT GCTCGCGACG TTCCAGGCCT TCGGCATCGC GGCCGCGCTG GAGAATCAGC CGGGCCTCGT GACCGATCCG GGCGCGGTGT TCCGTCTGAC GACGGTCGTC ACGCTGGTGA CGGGCACGAT GTTCCTGATG TGGCTCGGCG AGCAGATCAC CGAGCGCGGT CTCGGCAACG GCATCTCGAT CATCATCTTC GGCGGGATCG CAGCAGGGTT CCCGAATGCC GTCGGTGGGC TGTTCGAGCT GGTGCGCACG GGTTCGATGA GCATCATTTC GGCGATCATC ATCGTCGTTC TGATCGCCGC GGTGACTTAC CTGGTCGTGT TCATCGAACG CGGTCAGCGC AAGATCCTCG TGAACTACGC GAAGCGCCAG GTCGGCAACA AGATTTACGG CGGGCAGTCG TCCCACCTGC CGCTGAAGTT GAACATGTCG GGCGTGATTC CGCCGATCTT CGCATCGTCG ATCATCCTGT TTCCGGCGAC GATCCTGAGC TGGTTCAGCT CGGGCGAGCG CAAGGGCTGG ATGTCCGACA CGCTGCACAA CGTCGCGGAA GCGCTGAAGC CGGGCCAGCC GGTGTATGTG CTGCTGTACA CGCTGGCAAT CGTGTTTTTC TGCTTCTTCT ACACCGCGCT GGTGTTCAAC AGCAGGGAAA CCGCAGACAA CCTGAAGAAG AGCGGTGCAT TCGTGCCGGG CATTCGTCCG GGCGACCAGA CCGCGCGGTA CATCGACCGG ATCCTCACGC GTCTCACGCT GGCCGGTGCG ATCTACATCG TCTTCGTGTG TCTGCTGCCG GAGTTCCTGG TGCTGCGCTG GAACGTGCCG TTTTATTTTG GTGGAACGTC GCTGCTGATC ATTGTCGTCG TCACGATGGA CTTCATGGCG CAGGTGCAGT CGTACGTTAT GTCGCAACAG TATGAGTCGC TGCTCAAGAA AGCCAATTTC AAGGGCGGCA ACATCCCAAT GCGTTAA
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Protein sequence | MANSPSLAKP GRSTAKFGDL RRRAMFLLLA LIVYRIGAHI PVPGIDPDQL AKLFQSQAGG ILGMFNMFSG GALSRFTIFA LGIMPYISAS IIMQLMAIVS PQLEALKKEG QAGQRKITQY TRYFTVVLAT FQAFGIAAAL ENQPGLVTDP GAVFRLTTVV TLVTGTMFLM WLGEQITERG LGNGISIIIF GGIAAGFPNA VGGLFELVRT GSMSIISAII IVVLIAAVTY LVVFIERGQR KILVNYAKRQ VGNKIYGGQS SHLPLKLNMS GVIPPIFASS IILFPATILS WFSSGERKGW MSDTLHNVAE ALKPGQPVYV LLYTLAIVFF CFFYTALVFN SRETADNLKK SGAFVPGIRP GDQTARYIDR ILTRLTLAGA IYIVFVCLLP EFLVLRWNVP FYFGGTSLLI IVVVTMDFMA QVQSYVMSQQ YESLLKKANF KGGNIPMR
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