| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3625 |
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| Symbol | |
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| ID | 4881723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 3546300 |
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| End bp | 3550193 |
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| Gene Length | 3894 bp |
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| Protein Length | 1297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640129553 |
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| Product | hypothetical protein |
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| Protein accession | YP_001060630 |
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| Protein GI | 126440145 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCT TCCTCAACGT GTTGACTCAC CCTCGCACGC TCACGATCGT CGGCTTCGCC
GCGCTCGCGG CGGTTCTGTT CATCGCGGCC GACGCGCTCC AGATCGGCCT CGCATGGGCG
GCCGTCGCGC TCGGTGTCGC GCTCGCGCTC TGGCTCGCGA CGAAGCTCTG GCGCCGCTGG
CGCGTGCGCC GCGCGAACCG CCAGCTCGGC GACATGCTCG AGCAGCAGGC CGAAACGGGC
AAGATGTCCG CCGCCGTGGC CGAGCCCGCG AAGCGCGCGG AGCTCGACGT GCTGCGCACC
CGCCTCGCCG ACACGGTGAA GACGATCAAG ACTTCGAAAA TCGGCCAGGT GTCGGGCGGC
TCCGCGCTGT ACGAACTGCC GTGGTACATC GTGATCGGCA ATCCGGCCGC GGGCAAGAGC
AGCGCCGTCA TCAACTCGGG GTTGCAGTTT CCGTTCGCGG ACAAGAACAG CGCGGTGATC
CACGGCATCG GCGGCACGCG CAACTGCGAC TGGTTCTTCA CGACCGAAGG CATCCTGCTC
GACACCGCGG GCCGCTATTC GGTGCACGAG GAAGACCGCA GCGAATGGCT CGGCTTTCTC
GATCTGCTCA AGCGCTATCG CCCGAAGGCC CCGATCAACG GCATCATCGT GACGGCGAGC
ATCGCCGAGC TCACCGGCAA TCGCCCCGAA TTCGCGATCA ACCTCGCGAA GAACCTGCGC
CAGCGCGTGC AGGAGCTCAC CGAGAAGCTC GAAGTGTTCG CGCCCGTCTA CGTGATGTTC
ACGAAGGCCG ACCTGATCAC GGGCTTCACC GAATTCTTCA GCAGCAACGA TCGCCAGGAA
TACGACCGCG TATGGGGCGC GACGCTGCCG TACGAGCCTG ACGAGAAGCG CGACGTGGTC
GCGCTGTTCG ATCAGCGCTT CGAGGAACTG TATGACGGGC TCAAGGAAAT CAGCGTCGCG
CAGCTGTCGG TGAGCCGCGG CAACAAGCTC TCGCCCGGCC AGTTGAGCTT CCCGCTCGAA
TTCTCGACGA TCAAGCCCGC GCTGCGCTCG TTCCTCGCGA CGCTGTTCGA GGACAACCCG
TTCCAGTACA AGCCGATCTT CCGCGGCTTC TACTTCACGA GCGCGCTGCA GGAAGGCGAA
ACGAACAGCG CGGCCGCGCA GCGGATCGCG CACCGCTTCG GGCTCGATTC GCAAAGCCTG
CCGAAGCCGC ACAGCGCGTT CTCGAAGAAC GGCTTCTTCC TGCGCGACCT GTTTTCGAAG
GTGATCTTCG CCGATCGCCA GACGGTCCGC CAGTTCGCGA GCCCGACGAA GACGCGCGTG
CGCTACGCGA CGTTCTTCGG CTTCGTCGCG GCGCTCGCGC TCGCGCTCGG CGGCTGGACC
TGGTCGACGA TCGGCAACCA GCAACTCGTC TCGAACGTGC AGGCCGACCT CGACAACGTG
ACCCGCCTGC AGCAGAACCG CAACGATCTG CAATCTCGCC TGCAGGCGAT GGACATCCTC
GAGGATCGGA TCGAGCAGCT CGAGCAGTTC CGGCGCGACA AGCCGCTGTC CGTCTCGCTC
GGCCTGTATC AGGGCAATCG GCTCGAGCAG CACCTGTTGA CCGAGTACTA CAACGGCGTG
CGGCAGATCC TGCTCGCTCC CGTGTCGGAC AATCTCGCGT CGTTCCTGAA GGACGTGAAC
GCGCATCCGG ACCAGCTCGC GCCGATGACG CGCGCGCCCG AATCGGGCGC GACGCCGGCC
GGCCCGATGC CGGTATCGAC CCATCCCGCG GCGCCGGGCG CGGCCCCCTC CCCCGTCGTC
GCGCAGGGCC GGCAGCAGGG CGGCCTCTAT AACGACGCGT CGCCGACCAA CGTCGAGGAC
GCGTACAACG CGCTGAAGAC CTACCTGATG CTCTCCGACA AGCGGCACGT CGAGCAGGCG
CACCTGACCG ATCAGGTCGC GCGCTTCTGG CGCGGCTGGC TCGAGACGAA TCGCGGCAAC
ATGCCGCGCG ACGAGATGAT CAAGAGCGCG GAGCGAATGA TCACGTTCTA CCTGTCGCGT
GTGTCCGACA ACGACTGGCC GATGATCGAG GCGAATCTCG CGCTCGTCGA CCAGACCCGC
GAGAACCTGC GCCGCGTCGT GCGCGGCATG CCGGCCCGCC AGCGCGTGTA TGAAGAGATC
AAGGCGCGCG CGTCGACCCG CTTCGCGCCG ATGACGATCG CGCGCATCGT CGGCGAAGGC
AACACCGGCC TCGTCGCGGG CAGCTACGCG ATCCCCGGCA CGTTCACGCG CGACGCGTGG
TTCCAGTACG TGCAGCCGGC GATCCGCGAC GCCGCGACGA AGGAGCTGCA GGCGAAGGAT
TGGGTGCTGA ACACCGCGTC GGCGGACGAT CTGACGCTCG AGGGCAGCCC CGAGCAGATC
CAGAAGACGC TCGTCGCGAT GTACAAGACC GAGTACGCAC AGCACTGGCA GAAGTTCATG
CAGGGCATCG CGGTGCAGGG CTTCGGCAAT TTCACGCAGG CGGTCGACGC GATGAACAAG
CTCGGCGATC CGCAGGATTC GCCGATCCGC AAGGTGCTCG AGACCGCGTA CGACCAGACC
TCGTGGGACA ACCCGTCGCT CGCGAACGCG ACGATCAAGA AGGCGCAGAC GGGCGTCGTG
AACTGGGTCA AGCAGTGGTT CACGCGCCAG CCGGGCGGCC AGATCGCGGC GAACGTCGAC
ATCAACGGCA ATCCCGCCGA CGTGCCGATG GGCCCGATCG GCCAGGAGTT CGTCGGGCTC
GGCCGGATCG TCGCCACGCA CGACGGCACG TCGATGCTCA AGGGCTACAT GGACACGCTG
TCGAAGGTCC GCACGCGCTT TAACGTGATC AAGAACCAGG GCGACCCCGG CCCCGGCGCG
CGTCAGCTGA TGCAGCAGAC GCTCGACGGC AACGGCTCGG AGCTCGCCGA TTCGCTGAAG
TTCGTCGACG AGCAGATGCT CACGGGCTTG ACCGATTCGC AACGCAAATC GCTGCGCCCG
CTTCTCGTGC GCCCGCTGAT GCAGGCGTTC GCGGTCGTGA TCCAGCCGGC GAGCGTCGAG
GTGAACAAGG TATGGAACGC GCAGGTGTAC CAGCCGTTCC AGAACTCGCT CGCGAACAAG
TATCCGTTCG CGGCGGGCGC GAAGGTCGAG GCGGGCGCGG GCGAGATCGC GCAGGTGTTC
GGCCCCGACG GCTCGATCGC GAAGTTCGTC GGCACGACGC TCGGCCCGCT CGCGGTGCGC
CGCGGCGACA CGCTGTCCGC GCGCACCTGG GGCGACATGG GCCTCGCGCT CACGCCGGAC
TTCACGGGCG GCTTCGCGCG CTGGGTCGCG CCGCTCGCGG GCGGCGCGGC GACGAGCGCG
GCCGCGTCGT CCGAGCCGCA GACCGTGTTC CAGGTGCTGC CGCAGCCGAG CAGCGGCACG
ACCGAATACA CGATCGCGAT CGACGGCCAG CAGTTGCGCT ACCGCAACAC GCCGCCGCAA
TGGACGAACT TCGTGTGGCC GAACCCGCAG GGCTCGCCCG GCGCGACGCT GTCCGCGACG
ACCTTCGACG GCCGCACGTT GCAGCTCGTC AACGAGCCGG GCCGCTACGG CCTCGAGAAG
CTGATCAACT CGGCGCAGCG CAAGCGCCGT CCGGACGGCA CGTTCGATCT GACATGGACG
CAGGGCAGCG TCAGCGTCTC TGTGACGATG CGCATCATCA GCACCTCGCA GCCGACGGGC
GGCGGCGATC AGCCGCAGCA GCAAAGCCTG CGCGGCCTGC GCCTGCCTTC GTCGGTCGCC
GACGCGAGCG CGGGCGGCGC GGCCAATGCG ACGGCGCAAC CCGGCTCGGG CGCCGCGGCC
CCGCAGGTCG CCGCCACGGC CGCTTCCGCA TCGAACGCAC AGGGGGCGCA ATGA
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| Protein sequence | MQRFLNVLTH PRTLTIVGFA ALAAVLFIAA DALQIGLAWA AVALGVALAL WLATKLWRRW
RVRRANRQLG DMLEQQAETG KMSAAVAEPA KRAELDVLRT RLADTVKTIK TSKIGQVSGG
SALYELPWYI VIGNPAAGKS SAVINSGLQF PFADKNSAVI HGIGGTRNCD WFFTTEGILL
DTAGRYSVHE EDRSEWLGFL DLLKRYRPKA PINGIIVTAS IAELTGNRPE FAINLAKNLR
QRVQELTEKL EVFAPVYVMF TKADLITGFT EFFSSNDRQE YDRVWGATLP YEPDEKRDVV
ALFDQRFEEL YDGLKEISVA QLSVSRGNKL SPGQLSFPLE FSTIKPALRS FLATLFEDNP
FQYKPIFRGF YFTSALQEGE TNSAAAQRIA HRFGLDSQSL PKPHSAFSKN GFFLRDLFSK
VIFADRQTVR QFASPTKTRV RYATFFGFVA ALALALGGWT WSTIGNQQLV SNVQADLDNV
TRLQQNRNDL QSRLQAMDIL EDRIEQLEQF RRDKPLSVSL GLYQGNRLEQ HLLTEYYNGV
RQILLAPVSD NLASFLKDVN AHPDQLAPMT RAPESGATPA GPMPVSTHPA APGAAPSPVV
AQGRQQGGLY NDASPTNVED AYNALKTYLM LSDKRHVEQA HLTDQVARFW RGWLETNRGN
MPRDEMIKSA ERMITFYLSR VSDNDWPMIE ANLALVDQTR ENLRRVVRGM PARQRVYEEI
KARASTRFAP MTIARIVGEG NTGLVAGSYA IPGTFTRDAW FQYVQPAIRD AATKELQAKD
WVLNTASADD LTLEGSPEQI QKTLVAMYKT EYAQHWQKFM QGIAVQGFGN FTQAVDAMNK
LGDPQDSPIR KVLETAYDQT SWDNPSLANA TIKKAQTGVV NWVKQWFTRQ PGGQIAANVD
INGNPADVPM GPIGQEFVGL GRIVATHDGT SMLKGYMDTL SKVRTRFNVI KNQGDPGPGA
RQLMQQTLDG NGSELADSLK FVDEQMLTGL TDSQRKSLRP LLVRPLMQAF AVVIQPASVE
VNKVWNAQVY QPFQNSLANK YPFAAGAKVE AGAGEIAQVF GPDGSIAKFV GTTLGPLAVR
RGDTLSARTW GDMGLALTPD FTGGFARWVA PLAGGAATSA AASSEPQTVF QVLPQPSSGT
TEYTIAIDGQ QLRYRNTPPQ WTNFVWPNPQ GSPGATLSAT TFDGRTLQLV NEPGRYGLEK
LINSAQRKRR PDGTFDLTWT QGSVSVSVTM RIISTSQPTG GGDQPQQQSL RGLRLPSSVA
DASAGGAANA TAQPGSGAAA PQVAATAASA SNAQGAQ
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