| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3590 |
|---|
| Symbol | prfA |
|---|
| ID | 4883546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 3516128 |
|---|
| End bp | 3517210 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640129518 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_001060595 |
|---|
| Protein GI | 126440521 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.637465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA GCATGCAAAG CAAGCTCGAC CAGCTCACAA CCCGGCTGGC CGAACTGAAC
GACCTGTTGA GCCGCGAGAA CGTCACCGCG GACCTCGACC AGTATCGCAA GCTGACGCGC
GAGCACGCGG AGATCGGCCC CGTCGTCGAG CACTACGCGC AGTGGCGCCA GGCGCGCGCC
GACGAACTCG CCGCGCAGGA ACTGCTCGCC GACGCCTCGA TGCGCGATTT CGCCGAGGAC
GAGCTGCGCG GCGCGCGCGA CCGGATGGGC CGCCTCGCGG CCGAGCTGCA GACGATGCTG
CTGCCGAAGG ACCCGAACGA CGAGCGCAAC ATCTTCGTCG AAATCCGCGC GGGCACGGGC
GGCGACGAAT CGGCGCTGTT CGCGGGCGAC CTGCTGCGGA TGTACCTGCG CTACGCGGAG
CGGCAGCGCT GGCAGGTCGA GATGATGTCG GAGAGCCCGT CGGATCTCGG CGGCTACAAG
GAAGTGATCG TGCGGATCGC GGGCTACGGC GCGTACTCGC GCCTGAAGTT CGAATCGGGC
GGCCACCGCG TGCAGCGCGT GCCCGCGACC GAGACGCAGG GCCGCATCCA TACGTCCGCG
TGCACGGTCG CGGTGATGCC CGAGGCCGAC GAGATCGGCG AAGTCGAGAT CAATCCGGCC
GATTTGCGGA TCGACACGTT TCGCGCGTCG GGCGCGGGCG GCCAGCACAT CAACAAGACC
GATTCGGCGG TGCGCGTCAC GCACATCCCG ACGGGAATCG TCGTCGAGTG CCAGGACGAC
CGCTCGCAGC ACAAGAACAA GGACCGCGCG CTGAAGGTGC TCGCCGCGCG GATCAAGGAC
AAGCAGTATC ACGAGCAGCA CGCGAAGGAG GCAGCCACGC GCAAGAGCCT GATCGGCTCG
GGCGACCGCT CCGAGCGGAT CCGCACGTAC AACTTCCCGC AGGGCCGGAT GACCGATCAC
CGGATCAACC TGACGCTGTA CAAGCTCGAG CAGATCATGG ACGGCGATCT CGACGAGCTG
ATCGCCGCGC TCGTGAGCGA GCACCAGGCC GAGCTGCTCG CCTCGCTCGG CGACGCCGAA
TGA
|
|---|
| Protein sequence | MKTSMQSKLD QLTTRLAELN DLLSRENVTA DLDQYRKLTR EHAEIGPVVE HYAQWRQARA
DELAAQELLA DASMRDFAED ELRGARDRMG RLAAELQTML LPKDPNDERN IFVEIRAGTG
GDESALFAGD LLRMYLRYAE RQRWQVEMMS ESPSDLGGYK EVIVRIAGYG AYSRLKFESG
GHRVQRVPAT ETQGRIHTSA CTVAVMPEAD EIGEVEINPA DLRIDTFRAS GAGGQHINKT
DSAVRVTHIP TGIVVECQDD RSQHKNKDRA LKVLAARIKD KQYHEQHAKE AATRKSLIGS
GDRSERIRTY NFPQGRMTDH RINLTLYKLE QIMDGDLDEL IAALVSEHQA ELLASLGDAE
|
|---|
| |