| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3547 |
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| Symbol | pcaF |
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| ID | 4883722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 3481201 |
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| End bp | 3482418 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640129475 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001060552 |
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| Protein GI | 126441801 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.008459 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGAAT TCGACATGAC CGAAGCATTC CTGTGTGACG CAATCCGCAC GCCCATCGGC
CGCTACGGCG GCGCGCTGGC GCCGGTGCGG GCCGACGACC TCGGCGCGGT GCCGCTCAAG
GCGCTCGTCG AGCGCAACCG CGACGTCGAC TGGGCCGCCG TCGACGACGT GATCTACGGC
TGCGCGAACC AGGCCGGCGA GGACAACCGC AACGTCGCGC GCATGTCGCT GCTGCTCGCC
GGCTTGCCGC ACGCCGTGCC CGGCGCGACG ATCAACCGCC TCTGCGGCTC CGGGATGGAC
GCGATCGGCC TTGCCGCGCG CGCGATCAAG GCGGGCGAGG CGAGCCTGAT GATCGCCGGC
GGCGTCGAGA GCATGAGCCG CGCGCCGTTC GTGACCGGCA AGGCGACGAG CGCGTTCTCG
CGCCAGGCCG AGATCTTCGA TACGACCATC GGCTGGCGCT TCGTCAATCC GCTGATGAAA
CAACGGTACG GCGTCGATTC GATGCCGGAG ACGGCCGAAA ATGTCGCGAC CGATTACCGC
GTGAGCCGCG CCGATCAGGA CGCGTTCGCG CTGCGCAGCC AGCAGAAGGC GGCGCGCGCG
CAGGCCGACG GCACGCTCGC GCAGGAGATC GCGCCGGTGA CGATCGCGCA GAAGAAGGGC
GAGCCGCTCG TCGTGGCGCG CGACGAGCAT CCGCGCGAGA CGACCCTCGA GGCGCTCGCG
AAGCTCAAGG GCGTGGTGCG CCCGGACGGC ACGGTGACGG CGGGCAACGC GTCGGGCGTG
AACGACGGTG CGTGCGCGCT GCTGGTGGCG AGCGAGGCGG CGGCGCGCCG CCACGGGCTC
GTGCCGCGCG CGCGCGTGCT GGGGATCGCG ACGGCGGGCG TGGAGCCGCG GGTGATGGGG
ATCGGCCCGG CGCCGGCGAC GCAGAAGCTG CTCGCGCGGC TCGGGATGAC GCTCGACCAG
TTCGACGTGA TCGAGCTGAA CGAGGCGTTC GCGTCGCAGG GGCTCGCGGT GCTGCGGCTG
CTGGGCGTCG CGGACGACGA TGCGCGGGTG AATCCGAACG GCGGCGCGAT CGCGCTCGGG
CATCCGCTTG GCGCGTCGGG CGCGCGGCTC GTGACGACCG CCACGTATCA GTTGCACCGC
ACGGGCAGCC GCTTCGCGCT CTGCACGATG TGCATCGGCG TCGGCCAGGG CATCGCGATC
GCGATCGAGC GCGTATAA
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| Protein sequence | MPEFDMTEAF LCDAIRTPIG RYGGALAPVR ADDLGAVPLK ALVERNRDVD WAAVDDVIYG
CANQAGEDNR NVARMSLLLA GLPHAVPGAT INRLCGSGMD AIGLAARAIK AGEASLMIAG
GVESMSRAPF VTGKATSAFS RQAEIFDTTI GWRFVNPLMK QRYGVDSMPE TAENVATDYR
VSRADQDAFA LRSQQKAARA QADGTLAQEI APVTIAQKKG EPLVVARDEH PRETTLEALA
KLKGVVRPDG TVTAGNASGV NDGACALLVA SEAAARRHGL VPRARVLGIA TAGVEPRVMG
IGPAPATQKL LARLGMTLDQ FDVIELNEAF ASQGLAVLRL LGVADDDARV NPNGGAIALG
HPLGASGARL VTTATYQLHR TGSRFALCTM CIGVGQGIAI AIERV
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